Abstract

We introduced nine site-directed mutations into seven conserved fission yeast proliferative cell nuclear antigen (PCNA) residues, Leu2, Asp63, Arg64, Gly69, Gln201, Glu259, and Glu260, either as single or as double mutants. Both the recombinant wild type and mutant PCNAs were able to form homotrimers in solution and to sustain growth of a null pcna strain (Deltapcna). Wild type Schizosaccharomyces pombe PCNA and PCNA proteins with mutations in Asp63, Gln201, Glu259, or Glu260 to Ala were able to stimulate DNA synthetic activity and to enhance the processivity of calf thymus DNA polymerase delta holoenzyme similar to calf thymus PCNA. Mutations of Leu2 to Val or Arg64 to Ala, either singly or as a double mutant, yielded PCNA mutant proteins that had reduced capacity in enhancing the processivity of DNA polymerase delta but showed no deficiency in stimulation of the ATPase activity of replication factor C. S. pombe Deltapcna strains sustained by these two mutant-pcna alleles had moderate defects in growth and displayed elongated phenotypes. These cells, however, were not sensitive to UV irradiation. Together, these in vitro and in vivo studies suggest that the side chains of Leu2 and Arg64 in one face of the PCNA trimer ring structure are two of the several sites involved in tethering DNA polymerase delta for processive DNA synthesis during DNA replication.

Highlights

  • Proliferating cell nuclear antigen (PCNA)1 is a multifunctional protein in the cell

  • Mutation of this residue in budding yeast PCNA to Asp has been shown to suppress cold-sensitive alleles of CDC44, which encodes the large subunit of budding yeast replication factor C [41]

  • The three-dimensional structure of budding yeast PCNA indicates that residues Leu2, Asp63, and Arg64 are located in one region of the PCNA homotrimer

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Summary

Introduction

Proliferating cell nuclear antigen (PCNA) is a multifunctional protein in the cell. It was originally identified as the auxiliary protein for DNA polymerase ␦ during DNA replication [1, 2]. PCNA has recently been found to physically bind flap endonuclease I, which is a 5Ј-flap DNA endonuclease and a nick-specific 5Јexonuclease [20], and to stimulate flap endonuclease I activity This interaction is thought to be important for lagging strand synthesis and is implicated in a broad range of DNA metabolisms in which the flap endonuclease I nuclease family is involved [21]. Structural data have suggested that PCNA forms a homotrimer torus that encircles DNA and interacts with DNA polymerase ␦, tethering it for processive DNA synthesis. We analyzed nine site-directed mutations in seven conserved residues of fission yeast PCNA for their function in enhancing DNA polymerase ␦ processivity in vitro and their biological effects in vivo

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