Abstract

The H(+)-translocating F(0)F(1)-ATP synthase of Escherichia coli functions as a rotary motor, coupling the transmembrane movement of protons through F(0) to the synthesis of ATP by F(1). Although the epsilon subunit appears to be tightly associated with the gamma subunit in the central stalk region of the rotor assembly, several studies suggest that the C-terminal domain of epsilon can undergo significant conformational change as part of a regulatory process. Here we use disulfide cross-linking of substituted cysteines on functionally coupled ATP synthase to characterize interactions of epsilon with an F(0) component of the rotor (subunit c) and with an F(1) component of the stator (subunit beta). Oxidation of the engineered F(0)F(1) causes formation of two disulfide bonds, betaD380C-S108C epsilon and epsilonE31C-cQ42C, to give a beta-epsilon-c cross-linked product in high yield. The results demonstrate the ability of epsilon to span the central stalk region from the surface of the membrane (epsilon-c) to the bottom of F(1) (beta-epsilon) and suggest that the conformation detected here is distinct from both the "closed" state seen with isolated epsilon (Uhlin, U., Cox, G. B., and Guss, J. M. (1997) Structure 5, 1219-1230) and the "open" state seen in a complex with a truncated form of the gamma subunit (Rodgers, A. J., and Wilce, M. C. (2000) Nat. Struct. Biol. 7, 1051-1054). The kinetics of beta-epsilon and epsilon-c cross-linking were studied separately using F(0)F(1) containing one or the other matched cysteine pair. The rate of cross-linking at the epsilon/c (rotor/rotor) interface is not influenced by the type of nucleotide added. In contrast, the rate of beta-epsilon cross-linking is fastest under ATP hydrolysis conditions, intermediate with MgADP, and slowest with MgAMP-PNP. This is consistent with a regulatory role for a reversible beta/epsilon (stator/rotor) interaction that blocks rotation and inhibits catalysis. Furthermore, the rate of beta-epsilon cross-linking is much faster than that indicated by previous studies, allowing for the possibility of a rapid response to regulatory signals.

Highlights

  • F0F1-ATP synthases are found embedded in the membranes of mitochondria, chloroplasts, and bacteria

  • The ⑀ subunit appears to be tightly associated with the ␥ subunit in the central stalk region of the rotor assembly, several studies suggest that the C-terminal domain of ⑀ can undergo significant conformational change as part of a regulatory process

  • Oxidation of the Mutant ATP Synthase Yields a Disulfidelinked ␤-⑀-c Product—To test for disulfide cross-linking of subunits in ␤D380C/⑀S108C/⑀E31C/cQ42C-F0F1, membranes were treated with DTNB

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Summary

TABLE I ATP hydrolysis and proton transport by reconstituted membranes

␤D380C/⑀S108C/⑀E31C-F1 was reconstituted with cQ42C-F0 in F1depleted membranes as described. Reconstituted membranes were incubated at 2 mg/ml for 1 h at 22 °C in TME buffer with 2 mM DTT (line 1), 2 mM DTT, and 50 ␮M DCCD (line 2), or 50 ␮M DTNB (line 3). ATPase and proton-pumping activities were measured as described under “Experimental Procedures.”. For NADH-driven proton pumping, the values given for fluorescence quenching represent the percentage decrease in fluorescence intensity obtained after addition of 0.5 mM NADH. For ATP-driven proton translocation, quenching obtained upon addition of 1 mM ATP was measured relative to the fluorescence level reached after the transmembrane gradient of protons was dissipated by addition of 4 ␮M FCCP. Values for NADH- and ATP-driven fluorescence quenching (assayed ϩDTT) were 77% and 83%, respectively, with native membranes expressing only the cQ42C mutation and 82% and 85%, respectively, for wild-type membranes

EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
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