Abstract

The Fas-activated serine/threonine kinase (FASTK) family of proteins has recently emerged as a central regulator of mitochondrial gene expression through the function of an unusual RNA-binding domain named RAP (for RNA-binding domain abundant in Apicomplexans), shared by all six members of the family. Here we describe the role of one of the less characterized members, FASTKD3, in mitochondrial RNA metabolism. First, we show that, in contrast to FASTK, FASTKD2, and FASTKD5, FASTKD3 does not localize in mitochondrial RNA granules, which are sites of processing and maturation of mtRNAs and ribosome biogenesis. Second, we generated FASTKD3 homozygous knock-out cell lines by homologous recombination and observed that the absence of FASTKD3 resulted in increased steady-state levels and half-lives of a subset of mature mitochondrial mRNAs: ND2, ND3, CYTB, COX2, and ATP8/6. No aberrant processing of RNA precursors was observed. Rescue experiments demonstrated that RAP domain is required for FASTKD3 function in mRNA stability. Besides, we describe that FASTKD3 is required for efficient COX1 mRNA translation without altering mRNA levels, which results in a decrease in the steady-state levels of COX1 protein. This finding is associated with reduced mitochondrial complex IV assembly and activity. Our observations suggest that the function of this family of proteins goes beyond RNA processing and ribosome assembly and includes RNA stability and translation regulation within mitochondria.

Highlights

  • The Fas-activated serine/threonine kinase (FASTK) family of proteins has recently emerged as a central regulator of mitochondrial gene expression through the function of an unusual RNA-binding domain named RAP, shared by all six members of the family

  • We confirm that FASTKD3 does not concentrate in endogenous mitochondrial RNA granules stained with the anti

  • We show that targeted disruption of FASTKD3 gene leads to an increase in the half-lives and steady-state levels of mature mitochondrial transcripts ND2, ND3, CYTB, COX2, and ATP8/6, and that this activity requires the RAP domain of FASTKD3

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Summary

Edited by Linda Spremulli

The Fas-activated serine/threonine kinase (FASTK) family of proteins has recently emerged as a central regulator of mitochondrial gene expression through the function of an unusual RNA-binding domain named RAP (for RNA-binding domain abundant in Apicomplexans), shared by all six members of the family. We describe that FASTKD3 is required for efficient COX1 mRNA translation without altering mRNA levels, which results in a decrease in the steady-state levels of COX1 protein This finding is associated with reduced mitochondrial complex IV assembly and activity. The identification and characterization of a novel family of mitochondrial proteins named FASTK (Fas-activated serine/ threonine kinase) have shed new light on the mechanisms controlling mitochondrial post-transcriptional RNA processing and translation. This family is composed of six members: FASTK, the founding member, and its homologs FASTKD1–5 [3]. We explore the role of FASTKD3 in mitochondrial RNA metabolism and translation

Results
Plasmid N
Wild type
RAP domain alignment
Discussion
Experimental Procedures

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