Abstract

Sessile plants possess an assembly of signaling pathways that perceive and transmit environmental signals, ultimately resulting in transcriptional reprogramming. Histone is a key feature of chromatin structure. Numerous histone-modifying proteins act under different environmental stress conditions to help modulate gene expression. DNA methylation and histone modification are crucial for genome reprogramming for tissue-specific gene expression and global gene silencing. Different classes of chromatin remodelers including SWI/SNF, ISWI, INO80, and CHD are reported to act upon chromatin in different organisms, under diverse stresses, to convert chromatin from a transcriptionally inactive to a transcriptionally active state. The architecture of chromatin at a given promoter is crucial for determining the transcriptional readout. Further, the connection between somatic memory and chromatin modifications may suggest a mechanistic basis for a stress memory. Studies have suggested that there is a functional connection between changes in nuclear organization and stress conditions. In this review, we discuss the role of chromatin architecture in different stress responses and the current evidence on somatic, intergenerational, and transgenerational stress memory.

Highlights

  • Reviewed by: Guillaume Moissiard, UMR5096 Laboratoire Génome et Développement des Plantes, France Bipin Kumar Pandey, University of Nottingham, United Kingdom

  • This review focuses on the scope and relevance of chromatin architecture in plant stress adaptations

  • These proteins are involved in DNA modification and repair (Kang et al, 2012) It has been studied that CRT1 and CRH1 are necessary for basal resistance, pathogen-associated molecular pattern (PAMP)-triggered immunity, systemic acquired resistance, and nonhost resistance

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Summary

Imitation Switch Subfamily Remodelers

The Imitation Switch (ISWI) subfamily remodelers comprise of two to four subunits initially purified from Drosophila melanogaster. The inositol requiring 80 (INO80) subfamily initially purified from S. cerevisiae is characterized by the presence of a split ATPase subunit with a long insertion found in the middle of the ATPase domain, which binds with the helicase-related (AAA-ATPase) Rvb1/2 proteins and one ARP protein. It is involved in transcription activation and DNA-double-strand break (DSB) repair (Bao and Shen, 2007). The ATPase subunits of the INO80 family and other ATPases in the SNF2 helicases are different, as a long spacer region is present in the INO80 complex that splits the conserved ATPase domain This region binds with RuVB-like subunits and Arps. The involvement of IN080 complexes in DNA repair is suggested by the presence of RuvB-like helicases

CHROMATIN MODIFICATIONS IN PLANT STRESS TOLERANCE
Role of Histone Chaperones in Stress Tolerance
Role of Histone Modifications in Stress Tolerance
Role of DNA Modifications in Stress Tolerance
Homolog of human TBC Subunit of polycomb group protein HMG protein
CHROMATIN ARCHITECTURE AT PROMOTERS DURING PLANT STRESS TOLERANCE
INTERGENERATIONAL AND TRANSGENERATIONAL STRESS MEMORY
CHROMATIN MODIFICATIONS AND PLANT DEVELOPMENT UNDER STRESS
EFFECT OF STRESS ON CHROMOCENTERS
OUTSTANDING QUESTIONS
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