Abstract

Streptococcus pneumoniae is a major cause of pneumonia, sepsis, and meningitis. Previously, we identified a novel virulence factor by investigating evolutionary selective pressure exerted on pneumococcal choline-binding cell surface proteins. Herein, we focus on another pneumococcal cell surface protein. Cell wall-anchoring proteins containing the LPXTG motif are conserved in Gram-positive bacteria. Our evolutionary analysis showed that among the examined genes, nanA and bgaA had high proportions of codon that were under significant negative selection. Both nanA and bgaA encode a multi-functional glycosidase that aids nutrient acquisition in a glucose-poor environment, pneumococcal adherence to host cells, and evasion from host immunity. However, several studies have shown that the role of BgaA is limited in a mouse pneumonia model, and it remains unclear if BgaA affects pneumococcal pathogenesis in a mouse sepsis model. To evaluate the distribution and pathogenicity of bgaA, we performed phylogenetic analysis and intravenous infection assay. In both Bayesian and maximum likelihood phylogenetic trees, the genetic distances between pneumococcal bgaA was small, and the cluster of pneumococcal bgaA did not contain other bacterial orthologs except for a Streptococcus gwangjuense gene. Evolutionary analysis and BgaA structure indicated BgaA active site was not allowed to change. The mouse infection assay showed that the deletion of bgaA significantly reduced host mortality. These results indicated that both nanA and bgaA encode evolutionally conserved pneumococcal virulence factors and that molecular evolutionary analysis could be a useful alternative strategy for identification of virulence factors.

Highlights

  • Streptococcus pneumoniae is one of most frequently isolated bacteria from community acquired pneumonia, sepsis, and bacterial meningitis (Ishiguro et al, 2013; CDC, 2019)

  • We investigated the percentage of codons in genes that encode cell wall-anchoring proteins that are under negative selection in S. pneumoniae species

  • Over 11% of codons in the nanA and bgaA genes had significant negative selection

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Summary

Introduction

Streptococcus pneumoniae is one of most frequently isolated bacteria from community acquired pneumonia, sepsis, and bacterial meningitis (Ishiguro et al, 2013; CDC, 2019). The phylogenetic relationship of both 16S rRNA and a core set of 136 genes indicated that this pathogen belongs to mitis group of Streptococcus (Kawamura et al, 1995; Richards et al, 2014). BgaA, a Pneumococcal Virulence Factor related species (Salvadori et al, 2019). In the United States of America, more than 30% of clinically isolated pneumococcal bacteria are resistant to one or more antibiotics (CDC, 2019). 23-valent pneumococcal polysaccharide and 13valent pneumococcal-conjugated vaccines are in use in various countries. These vaccines prevent pneumococcal infections caused by vaccine-targeted serotype strains and inhibit the spread of drug resistant strains (CDC, 2019). The selective pressure imposed by vaccination has increased the emergence of non-vaccine serotype strains (Golubchik et al, 2012)

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