Abstract

Recent advances in the engineering of picoscale gaps between electroburnt graphene electrodes provide new opportunities for studying electron transport through electrostatically gated single molecules. But first we need to understand and develop strategies for anchoring single molecules to such electrodes. Here, for the first time we present a systematic theoretical study of transport properties using four different modes of anchoring zinc-porphyrin monomer, dimer, and trimer molecular wires to graphene electrodes. These involve either amine anchor groups, covalent C-C bonds to the edges of the graphene, or coupling via π-π stacking of planar polyaromatic hydrocarbons formed from pyrene or tetrabenzofluorene (TBF). π-π stacked pyrene anchors are particularly stable, which may be advantageous for forming robust single-molecule transistors. Despite their planar, multiatom coupling to the electrodes, pyrene anchors can exhibit both destructive interference and different degrees of constructive interference, depending on their connectivity to the porphyrin wire, which makes them attractive also for thermoelectricity. TBF anchors are more weakly coupled to both the graphene and the porphyrin wires and induce negative differential conductance at finite source-drain voltages. Furthermore, although direct C-C covalent bonding to the edges of graphene electrodes yields the highest electrical conductance, electron transport is significantly affected by the shape and size of the graphene electrodes because the local density of states at the carbon atoms connecting the electrode edges to the molecule is sensitive to the electrode surface shape. This sensitivity suggests that direct C-C bonding may be the most desirable for sensing applications. The ordering of the low-bias electrical conductances with different anchors is as follows: direct C-C coupling > π-π stacking with the pyrene anchors > direct coupling via amine anchors > π-π stacking with TBF anchors. Despite this dependency of conductances on the mode of anchoring, the decay of conductance with the length of the zinc-porphyrin wires is relatively insensitive with the associated attenuation factor β lying between 0.9 and 0.11 Å-1.

Highlights

  • Recent advances in the engineering of picoscale gaps between electroburnt graphene electrodes provide new opportunities for studying electron transport through electrostatically gated single molecules

  • We study the electronic properties of zinc-porphyrin monomers, dimers, and trimers coupled to the graphene electrodes using a series of π−π or covalent anchoring groups

  • We shall demonstrate that different modes of anchoring have a greater effect on graphene-based device properties compared with equivalent molecular junctions formed using gold electrodes, which suggests that the choice of anchor group should be targeted at a particular application

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Summary

Nano Letters

Letter the electrical conductance of 10−4.7−10−4.5 G0 is relatively high compared with other single molecule junctions of similar length.[9]. The sensitivity of electrical conductance to electrode shape and edge termination is anchor-group dependent; the conductance of π−π stacked pyrene anchors is the least sensitive and direct C C coupling is the most sensitive This sensitivity suggests that direct C C bonding may be the most desirable for sensing applications, because the local density of states is affected by analytes binding to the electrode surface. The mean-field Hamiltonian obtained from the converged SIESTA DFT calculation was combined with our implementation of the nonequilibrium Green’s function method, the Gollum,[40] to calculate the phase-coherent, elastic scattering properties of the each system consist of left (source) and right (drain) graphene leads connected to the scattering region formed from monomer, dimer, and trimer porphyrin wires with different anchor groups.

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