Rhizosphere response to predicted vegetation shifts in boreal forest floors

Abstract

The boreal forest is the single largest terrestrial store of carbon on Earth, and approximately 25% of these carbon stocks are in the forest floor. Climate change is expected to alter boreal vegetation, and aspen-dominated stands will replace conifers in Western Canada. We investigated how these vegetation shifts could affect the composition and function of soil microbial communities, using forest floor samples from the Ecosystem Management Emulating Natural Disturbance (EMEND) project in northwestern Alberta, Canada. Soil microbial communities were surveyed in rhizosphere and bulk forest floor of 17-year-old spruce clear-cuts where aspen was naturally regenerating, mature stands of aspen and spruce, and 17-year-old clear-cuts of aspen. Phospholipid fatty acid (PLFA) analysis was used to characterize microbial community composition and multiple substrate induced respiration (MSIR) to quantify microbial community functional capacity. Carbon source utilization by microorganisms was investigated through natural abundance isotope analysis of individual PLFAs. Rhizosphere samples had a significantly higher proportion of fungi and a higher gram-negative to gram-positive bacteria ratio compared to bulk soil. Fungi and gram-negative bacteria biomarkers in the rhizosphere showed 13C depletion compared to bulk forest floor, indicating that they had assimilated more newly-photosynthesized carbon than bulk forest floor microbes. Aspen trees exerted a greater influence over their rhizospheres than spruce trees in terms of microbial community composition and functional capacity, and aspen rhizospheres showed the highest basal respiration. In less than two decades, aspen regeneration in former spruce stands shifted the composition of microbial communities towards that of native aspen stands, with the rhizosphere microbiome responding more quickly than bulk forest floor. This study suggests that predicted vegetation shifts in the boreal have the potential to cause more immediate and profound changes in the rhizosphere, and emphasizes the need to include the rhizosphere in future studies.