Abstract

Mutations in the depalmitoylating enzyme gene, PPT1, cause the infantile form of Neuronal Ceroid Lipofuscinosis (NCL), an early onset neurodegenerative disease. During recent years there have been different therapeutic attempts including enzyme replacement. Here we show that PPT1 is palmitoylated in vivo and is a substrate for two palmitoylating enzymes, DHHC3 and DHHC7. The palmitoylated protein is detected in both cell lysates and medium. The presence of PPT1 with palmitoylated signal peptide in the cell medium suggests that a subset of the protein is secreted by a nonconventional mechanism. Using a mutant form of PPT1, C6S, which was not palmitoylated, we further demonstrate that palmitoylation does not affect intracellular localization but rather that the unpalmitoylated form enhanced the depalmitoylation activity of the protein. The calculated Vmax of the enzyme was significantly affected by the palmitoylation, suggesting that the addition of a palmitate group is reminiscent of adding a noncompetitive inhibitor. Thus, we reveal the existence of a positive feedback loop, where palmitoylation of PPT1 results in decreased activity and subsequent elevation in the amount of palmitoylated proteins. This positive feedback loop is likely to initiate a vicious cycle, which will enhance disease progression. The understanding of this process may facilitate enzyme replacement strategies.

Highlights

  • Neuronal Ceroid Lipofuscinosis (NCL) represents a group of common progressive encephalopathies of children, which is further divided to ten different subtypes [1,2,3,4]

  • Palmitoyl-Protein Thioesterase 1 (PPT1) is a depalmitoylation enzyme, and while testing several putative substrates of PPT1, we noticed that PPT1 itself is a palmitoylated protein

  • Similar experiments were conducted with mouse PPT1, which is palmitoylated by DHHC3 and DHHC7 (S2 Fig)

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Summary

Introduction

Neuronal Ceroid Lipofuscinosis (NCL) represents a group of common progressive encephalopathies of children, which is further divided to ten different subtypes [1,2,3,4]. The pathological hallmarks of NCL are the accumulation of autofluorescent storage material in the brain and other tissues, progressive psychomotor retardation, visual failure, and seizures. Mutations in the palmitoyl protein thioesterase gene (PPT1) cause the infantile form of the disease [5], whereas less severe mutations in the same gene result in the juvenile form [6]. PPT1 (MIM256730, EC 3.1.2.22), is a thioesterase that normally functions to remove long-chain fatty acids from modified cysteine residues in proteins. The process of long-chain fatty acid addition, termed S-acylation, is often referred to as palmitoylation, since

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