Abstract

Resting state functional magnetic resonance imaging (rs-fMRI) has become an indispensable tool in neuroscience research. Despite this, rs-fMRI signals are easily contaminated by artifacts arising from movement of the head during data collection. The artifacts can be problematic even for motions on the millimeter scale, with complex spatiotemporal properties that can lead to substantial errors in functional connectivity estimates. Effective correction methods must be employed, therefore, to distinguish true functional networks from motion-related noise. Research over the last three decades has produced numerous correction methods, many of which must be applied in combination to achieve satisfactory data quality. Subject instruction, training, and mild restraints are helpful at the outset, but usually insufficient. Improvements come from applying multiple motion correction algorithms retrospectively after rs-fMRI data are collected, although residual artifacts can still remain in cases of elevated motion, which are especially prevalent in patient populations. Although not commonly adopted at present, “real-time” correction methods are emerging that can be combined with retrospective methods and that promise better correction and increased rs-fMRI signal sensitivity. While the search for the ideal motion correction protocol continues, rs-fMRI research will benefit from good disclosure practices, such as: (1) reporting motion-related quality control metrics to provide better comparison between studies; and (2) including motion covariates in group-level analyses to limit the extent of motion-related confounds when studying group differences.

Highlights

  • Since the first report of temporal correlations between spontaneous blood oxygenation leveldependent (BOLD) signals in the bilateral motor cortices (Biswal et al, 1995), “resting-state” functional magnetic resonance imaging has become an important tool to probe functionally connected networks throughout the brain (Smith et al, 2013b)

  • Head Motion can be revealed from a single resting-state” functional magnetic resonance imaging (rs-fMRI) study without the need to administer one or more prescribed behavioral tasks, typically by measuring BOLD signal correlations relative to a “seed” region of interest, or by using multivariate component models to identify networks based on statistical criteria

  • Two recent reports have indicated that this problem may be relevant for rs-fMRI at 3 T in a 16-channel coil geometry, for a conventional echo planar imaging (EPI) k-space readout (FarajiDana et al, 2016a) as well as for parallel imaging reconstruction, with worse artifacts occurring as the acceleration factor was increased (Faraji-Dana et al, 2016b)

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Summary

Frontiers in Neuroscience

Rs-fMRI signals are contaminated by artifacts arising from movement of the head during data collection. Research over the last three decades has produced numerous correction methods, many of which must be applied in combination to achieve satisfactory data quality. Improvements come from applying multiple motion correction algorithms retrospectively after rs-fMRI data are collected, residual artifacts can still remain in cases of elevated motion, which are especially prevalent in patient populations. While the search for the ideal motion correction protocol continues, rs-fMRI research will benefit from good disclosure practices, such as: (1) reporting motionrelated quality control metrics to provide better comparison between studies; and (2) including motion covariates in group-level analyses to limit the extent of motion-related confounds when studying group differences

INTRODUCTION
HEAD MOTION ARTIFACTS
Partial Volume Effects
Spin History Effects
Dynamic Geometric Distortions
Coil Sensitivity
CORRECTION STRATEGIES
Head Restraints and Behavioral Intervention
Imaging Protocol
Retrospective Motion Correction
CONCLUSION
Full Text
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