Reeb Graphs: Approximation and Persistence

Abstract

Given a continuous function f:X→ℝ on a topological space X, its level set f −1(a) changes continuously as the real value a changes. Consequently, the connected components in the level sets appear, disappear, split and merge. The Reeb graph of f summarizes this information into a graph structure. Previous work on Reeb graph mainly focused on its efficient computation. In this paper, we initiate the study of two important aspects of the Reeb graph, which can facilitate its broader applications in shape and data analysis. The first one is the approximation of the Reeb graph of a function on a smooth compact manifold M without boundary. The approximation is computed from a set of points P sampled from M. By leveraging a relation between the Reeb graph and the so-called vertical homology group, as well as between cycles in M and in a Rips complex constructed from P, we compute the H 1-homology of the Reeb graph from P. It takes O(nlogn) expected time, where n is the size of the 2-skeleton of the Rips complex. As a by-product, when M is an orientable 2-manifold, we also obtain an efficient near-linear time (expected) algorithm for computing the rank of H 1(M) from point data. The best-known previous algorithm for this problem takes O(n 3) time for point data. The second aspect concerns the definition and computation of the persistent Reeb graph homology for a sequence of Reeb graphs defined on a filtered space. For a piecewise-linear function defined on a filtration of a simplicial complex K, our algorithm computes all persistent H 1-homology for the Reeb graphs in $O(n n_{e}^{3})$ time, where n is the size of the 2-skeleton and n e is the number of edges in K.