Abstract

Microfluidic devices in combination with fluorescent microscopy offer high-resolution and high-content platforms to study single-cell morphology, behavior and dynamic process in replicative aging of budding yeast, Saccharomyces cerevisiae. However, a huge mass of recorded images makes the data processing labor-intensive and time-consuming to determine yeast replicative lifespan (RLS), a primary criterion in yeast aging. To address this limitation and pursue label-free RLS assays, electrical impedance spectroscopy (EIS) that can be easily functionalized through microelectrodes in microfluidic devices, was introduced to monitor cell growth and division of budding yeast. Herein, a microfluidic device integrated with EIS biosensor was proposed to perform in-situ impedance measurement of yeast proliferation in single-cell resolution so as to identify the momentary events of daughter dissection from its mother. Single yeast cells were reliably immobilized at the bottleneck-like traps for continuous culturing, during which daughter cells were effectively detached from their mother cells by hydraulic shear forces. Time-lapse impedance measurement was performed every 2 min to monitor the cellular process including budding, division and dissection. By using the K-means clustering algorithm to analyze a self-defined parameter “Dissection Indicator,” to our knowledge for the first time, the momentary event of a daughter removing from its mother cell was accurately extracted from EIS signals. Thus, the identification of daughter dissection events based on impedance sensing technology has been validated. With further development, this microfluidic device integrated with electrical impedance biosensor holds promising applications in high-throughput, real-time and label-free analysis of budding yeast aging and RLS.

Highlights

  • Budding yeast, Saccharomyces cerevisiae (S. cerevisiae), benefiting from its fast proliferation, short lifespan, easy maintenance, and fully-sequenced genome, has been extensively used as a model organism in aging studies (Gershon and Gershon, 2000; Fontana et al, 2010; Lippuner et al, 2014)

  • We report on an Electrical impedance spectroscopy (EIS)-biosensor-integrated microfluidic device, which is capable of hydrodynamic trapping, continuous culturing and in-situ electrical impedance monitoring of single budding yeast cells

  • A microfluidic device integrated with EIS biosensor has been developed to perform real-time and in-situ impedance monitoring of daughter dissection events of budding yeast cells

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Summary

Introduction

Saccharomyces cerevisiae (S. cerevisiae), benefiting from its fast proliferation, short lifespan, easy maintenance, and fully-sequenced genome, has been extensively used as a model organism in aging studies (Gershon and Gershon, 2000; Fontana et al, 2010; Lippuner et al, 2014). With the application of those devices in single-cell capturing, culturing and optical screening, RLS of budding yeast has been determined by analyzing massive timelapse images. Intensive data acquisition and timeconsuming image processing have put forward a major challenge to the real-time analysis of dynamic cellular process, especially for high-throughput and long-term single-cell replicative aging assay and RLS determination of budding yeast. By integrating microelectrodes with cell traps in microfluidic devices, in-situ EIS measurement of immobilized cells enables continuous monitoring of dynamic cellular process in single-cell resolution over an extended time period, such as cell growth and motion (Zhu et al, 2014), mitosis and cytokinesis (Ghenim et al, 2010; Zhu et al, 2015), as well as cell differentiation (Zhou et al, 2016). Developing a label-free and non-optical method to identify the dissection events of yeast daughter cells is desirable

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