Abstract
We present a full multimode treatment of the interaction of the quantized radiation field with a single two-level atom in a one-dimensional waveguide configuration. Starting with an incident pulse consisting of an arbitrary (finite) number of photons in a general initial state, we derive the equations of motion and a closed-form expression for the shape of the pulse after its interaction with the atom. We then specialize our results to the two-photon case where a number of analytical results can be derived, for both unidirectional and bidirectional systems. We study the effects of different pulse shapes, the manifestations of the entangled, so-called bound state of the two photons, single- and two-photon detection probabilities, and provide simple approximate results for the strong-coupling (or adiabatic, or long-pulse) regime. We also discuss the requirements for a true unidirectional setup, and the application of such a setup to photon sorting proposed by Witthaut, Lukin, and S\o{}rensen [Europhys. Lett. 97, 50007 (2012)].
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