Abstract

Buccal swabs and saliva are the two most common oral sampling methods used for medical research. Often, these samples are used interchangeably, despite previous evidence that both contain buccal cells and blood leukocytes in different proportions. For some research, such as epigenetic studies, the cell types contributing to the analysis are highly relevant. We collected such samples from twelve children and twenty adults and, using Papanicolaou staining, measured the proportions of epithelial cells and leukocytes through microscopy. To our knowledge, no studies have compared cellular heterogeneity in buccal swab and saliva samples from adults and children. We confirmed that buccal swabs contained a higher proportion of epithelial cells than saliva and that children have a greater proportion of such cells in saliva compared to adults. At this level of resolution, buccal swabs and saliva contained similar epithelial cell subtypes. Gingivitis in children was associated with a higher proportion of leukocytes in saliva samples but not in buccal swabs. Compared to more detailed and costly methods such as flow cytometry or deconvolution methods used in epigenomic analysis, the procedure described here can serve as a simple and low-cost method to characterize buccal and saliva samples. Microscopy provides a low-cost tool to alert researchers to the presence of oral inflammation which may affect a subset of their samples. This knowledge might be highly relevant to their specific research questions, may assist with sample selection and thus might be crucial information despite the ability of data deconvolution methods to correct for cellular heterogeneity.

Highlights

  • The oral cavity is an excellent source of easy-to-access biological material for studies of genetics, genotoxicity, epigenetics, proteomics, metabolomics, and microbiomes[1,2,3,4,5,6,7,8,9]

  • While cellular heterogeneity might have no impact on genetic sequence within an individual, with the possible exception of recombination in T and B lymphocytes, there are a number of reasons why knowing the proportions of leukocytes and buccal epithelial cells in oral samples is important

  • We found no evidence for an effect of gingivitis on leukocyte content in buccal swabs: 11.0% of cells in those with gingivitis were leukocytes compared to 8.9% in those without (P = 0.638)

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Summary

Introduction

The oral cavity is an excellent source of easy-to-access biological material for studies of genetics, genotoxicity, epigenetics, proteomics, metabolomics, and microbiomes[1,2,3,4,5,6,7,8,9] This is due to the quick, non-invasive and low cost collection compared to tissues such as blood[9,10]. The most popular sources of oral samples are saliva samples (collected by passive drool or swab) and buccal samples (collected by swabs or brushes) Both leukocytes (white blood cells) of mesodermal origin and squamous epithelial cells of ectodermal origin are found in the oral cavity (reviewed in[11]). Methods have been developed to adjust for cellular heterogeneity in epigenomic studies (reviewed in17–19,22), a knowledge of cellular heterogeneity in the primary samples would allow for more accurate adjustment[23]

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