Abstract

Microbial growth can be characterized by a limited set of macroscopic parameters such as growth rate, biomass yield and substrate affinity. Different culturing protocols for laboratory evolution have been developed to select mutant strains that have one specific macroscopic growth parameter improved. Some of those mutant strains display tradeoffs between growth parameters and changed metabolic strategies, for example, a shift from respiration to fermentation. Here we discuss recent studies suggesting that metabolic strategies and growth parameter tradeoffs originate from a common set of physicochemical and cellular constraints, associated with the allocation of intracellular resources over biosynthetic processes, mostly protein synthesis. This knowledge will give insight in ecological and biological concepts and can be used for metabolic and evolutionary engineering strategies.

Highlights

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  • UvA-DARE is a service provided by the library of the University of Amsterdam Download date:02 Nov 2021

  • Microbial growth can be characterized by a limited set of macroscopic parameters such as growth rate, biomass yield and substrate affinity

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Summary

Pirt SJ

Proc R Soc Lond Ser B Biol Sci 1965, 163:224-231. 4. Price ND, Reed JL, Palsson BØ: Genome-scale models of microbial cells: evaluating the consequences of constraints. 6. Molenaar D, van Berlo R, de Ridder D, Teusink B: Shifts in growth strategies reflect tradeoffs in cellular economics. 8. Bosdriesz E, Molenaar D, Teusink B, Bruggeman FJ: How fast growing bacteria robustly tune their ribosome concentration to approximate growth-rate maximization. Berkhout J, Teusink B, Bruggeman FJ: Gene network requirements for regulation of metabolic gene expression to a desired state. Proc Natl Acad Sci USA 2013, 110:10039-10044. Basan M, Hui S, Zhang Z, Shen Y, Williamson JR, Hwa T: Overflow metabolism in bacteria results from efficient proteome allocation for energy biogenesis. Shows that the protein cost for energy biosynthesis by respiration exceeds that by fermentation

14. Wolfe AJ
32. Ferenci T
50. Campbell A
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