Abstract

Polar and other low temperature environments are characterized by a low content in energy and this factor has a strong incidence on living organisms which populate these rather common habitats. Indeed, low temperatures have a negative effect on ectothermic populations since they can affect their growth, reaction rates of biochemical reactions, membrane permeability, diffusion rates, action potentials, protein folding, nucleic acids dynamics and other temperature-dependent biochemical processes. Since the discovery that these ecosystems, contrary to what was initially expected, sustain a rather high density and broad diversity of living organisms, increasing efforts have been dedicated to the understanding of the molecular mechanisms involved in their successful adaptation to apparently unfavorable physical conditions. The first question that comes to mind is: How do these organisms compensate for the exponential decrease of reaction rate when temperature is lowered? As most of the chemical reactions that occur in living organisms are catalyzed by enzymes, the kinetic and thermodynamic properties of cold-adapted enzymes have been investigated. Presently, many crystallographic structures of these enzymes have been elucidated and allowed for a rather clear view of their adaptation to cold. They are characterized by a high specific activity at low and moderate temperatures and a rather low thermal stability, which induces a high flexibility that prevents the freezing effect of low temperatures on structure dynamics. These enzymes also display a low activation enthalpy that renders them less dependent on temperature fluctuations. This is accompanied by a larger negative value of the activation entropy, thus giving evidence of a more disordered ground state. Appropriate folding kinetics is apparently secured through a large expression of trigger factors and peptidyl–prolyl cis/trans-isomerases.

Highlights

  • Polar ecosystems are characterized by a high diversity and abundance of microorganisms

  • Knowing that low temperatures have usually a negative effect on population growth, one has to conclude that a complete set of molecular adaptations has taken place to notably compensate for the freezing effect of low temperatures on reaction rate, diffusion rate, membrane permeability and nucleic acids dynamics, for instance

  • Reaction rates are clearly crucial for the survival of microorganisms at low temperatures, since they vary in an exponential way as a function of temperature according to the Arrhenius law, in which the rate constant, k = A. eíEa/RT, depends on the pre-exponential factor A, called frequency factor, which, in the reaction rate expression, derived from the transition state theory, takes the form of

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Summary

Introduction

Polar ecosystems are characterized by a high diversity and abundance of microorganisms. High cell densities are present in the Antarctic with figures of 5.4 to 7.9 × 107 cells per g of lake sediment [4], whereas in free waters, at Terra Nova Bay (Ross Sea) for example, cell counts vary from 0.1 to 15.7 × 105 cells mLí1 [5] These cell densities, both in the Arctic and Antarctic oceans, are similar to those recorded in temperate habitats and correspond to microbial diversities much greater than those initially expected [6]. The factor Ȗ is, in the context of viscosity, an extended expression of the old transmission factor ț that takes into account the probability that some of the activated molecules will return to the ground state rather than be transformed into product; in other words, they can re-cross the energy barrier This factor is usually neglected, but at low temperature, it can significantly differ from unity. This problem has been addressed by Siddiqui and coworkers [11]

General Properties of Cold-Adapted Enzymes
Activity and Stability
Thermodynamic Stability
Engineering Cold-Adapted Enzymes
Folding at Low Temperature
Findings
Conclusions
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