Abstract

Oculopharyngeal muscular dystrophy (OPMD) is a late-onset, primarily autosomal dominant disease caused by a short GCN expansion in the PABPN1 (polyadenylate-binding protein nuclear 1) gene that results in an alanine expansion at the N terminus of the PABPN1 protein. Expression of alanine-expanded PABPN1 is linked to the formation of nuclear aggregates in tissues from individuals with OPMD. However, as with other nuclear aggregate-associated diseases, controversy exists over whether these aggregates are the direct cause of pathology. An emerging hypothesis is that a loss of PABPN1 function and/or aberrant protein interactions contribute to pathology in OPMD. Here, we present the first global proteomic analysis of the protein interactions of WT and alanine-expanded PABPN1 in skeletal muscle tissue. These data provide both insight into the function of PABPN1 in muscle and evidence that the alanine expansion alters the protein-protein interactions of PABPN1. We extended this analysis to demonstrate altered complex formation with and loss of function of TDP-43 (TAR DNA-binding protein 43), which we show interacts with alanine-expanded but not WT PABPN1. The results from our study support a model where altered protein interactions with alanine-expanded PABPN1 that lead to loss or gain of function could contribute to pathology in OPMD.

Highlights

  • Oculopharyngeal muscular dystrophy (OPMD) is a late-onset, primarily autosomal dominant disease caused by a short GCN expansion in the PABPN1 gene that results in an alanine expansion at the N terminus of the PABPN1 protein

  • Immunoprecipitation of FLAG-PABPN1 from these electroporated muscles followed by MS allowed for the first comparison of the protein interactions of the WT and OPMD-associated alanine-expanded PABPN1 in skeletal muscle tissue

  • We examined the possible consequences of TDP-43 interactions with alanine-expanded PABPN1 by employing two additional OPMD mouse models

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Summary

Results

Levels of PABPN1 protein are very low in skeletal muscle [15], making biochemical studies of PABPN1 protein interactions in this disease-relevant tissue challenging [29]. Immunoblot analysis of fractions collected from top to bottom of the density gradients shows that TDP-43 in lysate from OPMD model (Ala-17/Ala10) myotubes migrates in heavier fractions when compared with lysate prepared from WT (Ala-10/Ala-10) myoblasts (Fig. 5B) These results imply that soluble TDP-43 exists in larger protein complexes in myotubes expressing Ala-17 PABPN1 than in control myotubes. HMW TDP-43 was not detected in the pellet fraction in control cells that express Ala-10/Ala-10 PABPN1 in either the absence (Ϫ) or the presence (ϩ) of hydrogen peroxide treatment This result demonstrates that TDP-43 is more prone to redox-mediated aggregation in cells obtained from the OPMD Ala-17/ Ala-10 mouse model compared with WT muscle cells. Results from quantitative RT-PCR analysis confirm the increased inclusion of the Sort1 17b cassette exon in myoblasts isolated from the OPMD Ala-17/Ala-10 mouse model (Fig. 6C) These data suggest that TDP-43 function is impaired in muscle cells expressing Ala-17 PABPN1. The increased uptake of both glucose and N-TAP PGRN suggests that the inclusion of the cassette exon in Sort affects the function of the SORT1 protein in muscle cells that express Ala-17 PABPN1

Discussion
Experimental procedures
Cell culture
Liquid chromatography and tandem MS
GO enrichment and network analysis
Glycerol density gradients
Solubility assay
RNA isolation and reverse transcription
Glucose uptake assay
PGRN uptake assay
Statistical analysis
Full Text
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