Abstract

Endophytes are well-acknowledged inoculants to promote plant growth, and extensive research has been done in different plants. However, there is a lacuna about the endophytes associated with tea clones and their benefit to promote plant growth. The present study focuses on isolating and characterizing the beneficial endophytic bacteria (EnB) prevalent in commercially important tea clones cultivated in North Eastern India as plant growth promoters. Diversity of culturable EnB microbiome, in vitro traits for plant growth promotion (PGP), and applicability of potent isolates as bioinoculant for in vivo PGP abilities have been assessed in the present study. A total of 106 EnB identified as members of phyla Proteobacteria, Firmicutes, and Actinobacteria were related to 22 different genera and six major clusters. Regarding PGP traits, the percentage of isolates positive for the production of indole acetic acid, phosphate solubilization, nitrogen fixation siderophore, ammonia, and 1-aminocyclopropane-1-carboxylic acid deaminase production were 86.8, 28.3, 78.3, 30.2, 95.3, and 87.7, respectively. In total, 34.0, 52.8, and 17.0% of EnB showed notable production of hydrolytic enzymes like cellulase, protease, and amylase, respectively. Additionally, based on the bonitur score, the top two isolates K96 identified as Stenotrophomonas sp. and M45 identified as Pseudomonas sp. were evaluated for biofilm formation, motility, and in vivo plant growth promoting activity. Results suggested strong biofilm formation and motility in K96 and M45 which may attribute to the colonization of the strains in the plants. Further in vivo plant growth promotion experiment suggested sturdy efficacy of the K96 and M45 as plant growth promoters in nursery condition in commercial tea clones Tocklai vegetative (TV) TV22 and TV26. Thus, this study emphasizes the opportunity of commercialization of the selected isolates for sustainable development of tea and other crops.

Highlights

  • Plants interact with a broad range of diverse bacteria having a beneficial, neutral, or pathogenic impact on their hosts, in both natural and managed ecosystems

  • 106 culturable Endophytic bacteria (EnB) were isolated from leaves and roots of five different tea clones using different enriched media and identified based on their morphological characteristics

  • The relative abundance of each EnB isolated was determined at the genus level in both leaf and root samples of the five different tea clones

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Summary

Introduction

Plants interact with a broad range of diverse bacteria having a beneficial, neutral, or pathogenic impact on their hosts, in both natural and managed ecosystems. Endophytes (bacteria or fungi) are an endosymbiotic group of microorganisms, ubiquitous in nature and well-known to dwell inside the plant endosphere without causing any apparent harmful effect on the host plant (Hallmann et al, 1997). Bacterial endophytes that have potentially beneficial effects on plant growth and development has been found in many genera including Arthrobacter, Azoarcus, Azospirillum, Azotobacter, Bacillus, Burkholderia, Curtobacterium, Erwinia, Gluconobacter, Klebsiella, Serratia, Pantoea, Herbaspirillum, Rahnella, Pseudomonas, and Xanthomonas (Zinniel et al, 2002; Berg et al, 2005; Compant et al, 2011)

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