Abstract

Ribosome biogenesis is tightly regulated through stress-sensing pathways that impact genome stability, aging and senescence. In Saccharomyces cerevisiae, ribosomal RNAs are transcribed from rDNA located on the right arm of chromosome XII. Numerous studies reveal that rDNA decondenses into a puff-like structure during interphase, and condenses into a tight loop-like structure during mitosis. Intriguingly, a novel and additional mechanism of increased mitotic rDNA compaction (termed hypercondensation) was recently discovered that occurs in response to temperature stress (hyperthermic-induced) and is rapidly reversible. Here, we report that neither changes in condensin binding or release of DNA during mitosis, nor mutation of factors that regulate cohesin binding and release, appear to play a critical role in hyperthermic-induced rDNA hypercondensation. A candidate genetic approach revealed that deletion of either HSP82 or HSC82 (Hsp90 encoding heat shock paralogs) result in significantly reduced hyperthermic-induced rDNA hypercondensation. Intriguingly, Hsp inhibitors do not impact rDNA hypercondensation. In combination, these findings suggest that Hsp90 either stabilizes client proteins, which are sensitive to very transient thermic challenges, or directly promotes rDNA hypercondensation during preanaphase. Our findings further reveal that the high mobility group protein Hmo1 is a negative regulator of mitotic rDNA condensation, distinct from its role in promoting premature condensation of rDNA during interphase upon nutrient starvation.

Highlights

  • Protein synthesis in all organisms takes place in the highly-conserved ribonucleoprotein complex - the ribosome

  • We find that mutation of heat shock/chaperone Hsp90 family members Hsp82 and Hsc82 result in significantly reduced rDNA hypercondensation

  • We test whether de novo cohesin deposition promotes hyperthermic-induced rDNA hypercondensation by inactivating the Scc2,4 heterocomplex that is required for cohesin deposition onto DNA (Ciosk et al, 2000; Watrin et al, 2006)

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Summary

Introduction

Protein synthesis in all organisms takes place in the highly-conserved ribonucleoprotein complex - the ribosome. RRNA arises from transcription of the rDNA locus that resides on the right arm of chromosome XII in the Saccharomyces cerevisiae yeast genome. This locus is approximately 1-2 Mb and consists of about 150 tandem repeats, each of which is 9.1 kb and encodes for. Alterations in rDNA structure and function have implications far beyond the canonical roles of the nucleolus in rDNA transcription and ribosome biogenesis (Tiku and Antebi, 2018; Schöfer and Weipoltshammer, 2018; Kobayashi and Sasaki, 2017). RDNA is the most highly represented gene in any eukaryote and the most heavily transcribed locus (accounting for over 60% of the entire RNA pool)

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