Abstract

Biological soil disinfestation (BSD) or anaerobic (reductive) soil disinfestation (ASD/RSD) is a bioremediation method used to eliminate soil-borne plant pathogens by exploiting the activities of anaerobic bacteria in soil. In this study, two obligate anaerobic bacterial strains isolated from BSD-treated soil and identified as Clostridium beijerinckii were examined for their abilities to suppress the spinach wilt disease pathogen (Fusarium oxysporum f. sp. spinaciae) as a representative soil-borne fungal plant pathogen. Both strains degraded β-1,3-glucan and chitosan, two major polysaccharide components of ascomycetes fungal cell wall, supplemented in the medium. β-1,3-Glucanase was detected in the supernatants of cultures supplemented with different types of glucan. Similarly, chitosanase was detected in cultures supplemented with chitosan. Both the enzyme activities were also detected in cultures containing glucose as a substrate. Live cells of F. oxysporum f. sp. spinaciae that were co-incubated with each anaerobic strain under anaerobic conditions using glucose as a substrate died during incubation. Freeze-dried dead fungal biomass of the pathogen, when added to the culture, supported good growth of both anaerobes and production of both enzymes. Severe and nearly complete degradation of both live and dead fungal cells during incubation with anaerobic bacteria was observed by fluorescence microscopy. When individual anaerobic bacterial strain was co-incubated with live pathogenic fungal cells in wheat bran, a popular material for BSD-treatment, both the strains grew well and killed the fungal pathogen promptly by producing both enzymes. These results indicate that both the bacterial strains attack the fungal cells by releasing extracellular fungal cell wall-degrading enzymes, thereby eliminating the pathogen.

Highlights

  • Biological soil disinfestation (BSD) or anaerobic soil disinfestation (ASD or RSD) is a method employed to suppress or eliminate soil-borne plant pathogens before starting the cultivation of crops, without using agricultural chemicals (Blok et al 2000; Goud et al 2004; Momma 2008; Momma et al 2013; Strauss and Kluepfel 2015)

  • We reported the ability of representative isolates (H110 and TB8), identified as Clostridium beijerinckii, to degrade components related to ascomycetes fungal cell wall (β-1,3-glucan and chitosan) and to kill the fungal pathogen (Fusarium oxysporum f. sp. spinaciae) under anaerobic conditions (Ueki et al 2017, 2018)

  • We investigated the enzymatic activities of the two anaerobic bacterial strains to degrade polysaccharides of ascomycetes fungal cell wall. β-1,3-Glucanase and chitosanase activities were detected in culture supernatants of both the strains cultivated with β-1,3-glucan or chitosan as growth substrates

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Summary

Introduction

Biological soil disinfestation (BSD) or anaerobic (reductive) soil disinfestation (ASD or RSD) is a method employed to suppress or eliminate soil-borne plant pathogens before starting the cultivation of crops, without using agricultural chemicals (Blok et al 2000; Goud et al 2004; Momma 2008; Momma et al 2013; Strauss and Kluepfel 2015). We isolated many anaerobic bacterial strains from soil samples subjected to BSD-treatments (Mowlick et al 2012, 2013a; Ueki et al 2017). We reported the ability of representative isolates (H110 and TB8), identified as Clostridium beijerinckii, to degrade components related to ascomycetes fungal cell wall (β-1,3-glucan and chitosan) and to kill the fungal pathogen We investigated the enzymatic activities of the two anaerobic bacterial strains to degrade polysaccharides of ascomycetes fungal cell wall. Fluorescence microscopy using a fluorescent dye (calcofluor white) showed that the mycelial cells of the Fusarium pathogen, regardless of whether living or dead, were completely degraded when co-incubated with either of the anaerobic bacterial strains

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