Abstract

Probing the cellular structure of in vivo biological tissue is a fundamental problem in biomedical imaging and medical science. This work introduces an approach for analyzing diffusion magnetic resonance imaging data acquired by the novel tensor-valued encoding technique for characterizing tissue microstructure. Our approach first uses a signal model to estimate the variance and skewness of the distribution of apparent diffusion tensors modeling the underlying tissue. Then several novel imaging indices, such as weighted microscopic anisotropy and microscopic skewness, are derived to characterize different ensembles of diffusion processes that are indistinguishable by existing techniques. The contributions of this work also include a theoretical proof that shows that, to estimate the skewness of a diffusion tensor distribution, the encoding protocol needs to include full-rank tensor diffusion encoding. This proof provides a guideline for the application of this technique. The properties of the proposed indices are illustrated using both synthetic data and in vivo data acquired from a human brain.

Highlights

  • Probing the cellular structure of in vivo biological tissue is a fundamental problem in biomedical imaging and medical science

  • Noninvasive probing of cellular structure of biological tissue in vivo is a fundamental problem in medical science

  • This work introduces a method for estimating the variance and skewness of a distribution of diffusion tensors as an approach for characterizing the microstructure of materials or biological tissue

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Summary

Introduction

Probing the cellular structure of in vivo biological tissue is a fundamental problem in biomedical imaging and medical science. The apparent diffusion tensor is a standard technique to characterize orientation-dependent diffusion which is related to the underlying cellular or axonal d­ irections[3] This simplistic model only reflects the diffusion tensor of the ensemble average process with no information provided about the underlying variance and other high-order moments of the distribution of diffusivity of all water molecules that are useful to characterize the tissue heterogeneity. This work introduces an approach for modeling and analyzing dMRI data acquired using novel QTE waveforms in order to derive several novel imaging indices based on the skewness of the diffusion tensor distribution These indices are able to distinguish different distributions of diffusion tensors that cannot be set apart by current approaches, providing new imaging measures of tissue microstructure. The feasibility of the proposed approach is illustrated using an in vivo dataset acquired from a human brain

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