Abstract

Porcine Epidemic Diarrhea Virus (PEDV) is the causative agent of swine epidemic diarrhea. In order to study the pathogenic mechanism of PEDV, PEDV was inoculated into Vero cells cultured in vitro, and the total RNA of Vero cells was extracted to construct a library for Illumina high-throughput sequencing and screening of differentially expressed genes (p < 0.05). Five differentially expressed genes for qRT-PCR verification analysis were randomly selected, and the verification results were consistent with the transcriptome sequencing results. The Kyoto Encyclopedia of Genes and Genomes (KEGG) signal pathway enrichment analysis was performed on the differentially expressed genes screened above. The results showed that the target gene annotations of differentially expressed genes in the African green monkey genome were mainly enriched in the TNF signaling pathway, the P53 signaling pathway, the Jak-STAT signaling pathway, the MAPK signaling pathway, and immune inflammation. In addition, it has been reported that Puma can promote apoptosis and is a key mediator of P53-dependent and non-dependent apoptosis pathways. However, there is no report that PEDV infection can activate Puma and induce apoptosis in a P53-dependent pathway. It was found by flow cytometry that PEDV infection induced apoptosis, and by Western Blotting detection, PEDV infection significantly increased the expression of p53, BAX, and Puma apoptosis-related proteins. Treatment Vero cells with the p53 inhibitor, PFT-α, could significantly inhibit PEDV-induced apoptosis. Studies have shown that PEDV infection can activate Puma and induce apoptosis in a P53-dependent pathway. These findings provide data support for further elucidating the pathogenic mechanism of PEDV and developing an effective vaccine against PEDV.

Highlights

  • Porcine Epidemic Diarrhea Virus (PEDV) belongs to the genus Nidovirales, Coronaviridae, Alpha Coronavirus, and is the causative agent of swine epidemic diarrhea [1,2]

  • The data based on transcriptome sequencing technology can be used to explore differentially expressed genes and related regulatory signaling pathways involved in PEDV infection after Vero cells, which contribute to investigating the pathogenesis of PEDV and providing data for vaccine development

  • Inverted fluorescence microscopy was used to observe the cytopathic effect at 12, 24, 36, and 48 h after Vero cells were inoculated with PEDV (MOI = 0.5)

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Summary

Introduction

PEDV belongs to the genus Nidovirales, Coronaviridae, Alpha Coronavirus, and is the causative agent of swine epidemic diarrhea [1,2]. The data based on transcriptome sequencing technology can be used to explore differentially expressed genes and related regulatory signaling pathways involved in PEDV infection after Vero cells, which contribute to investigating the pathogenesis of PEDV and providing data for vaccine development. Puma is expressed at a low level in normal cells, but when the cells are stimulated in a stressed state, Puma is quickly transcribed and translated, resulting in increasing expression efficiently and promoting apoptosis [15] This was verified in the results of this transcriptome sequencing. Puma and induce apoptosis in a P53-dependent pathway

Cell Culture and PEDV Infection
Total RNA Extraction and Quality Inspection of Vero Cell
GO Function Annotation Analysis of Differentially Expressed Genes
Apoptotic Rate Measurement
Western Blotting Analysis
MTT Treatments
2.10. Inhibitor Treatments
Results
Quality
Analysis of Differentially
Analysis of GO Function Annotation of Differentially Expressed Genes
PEDV Infection Induces Apoptosis in a Dose-Dependent Manner
KEGG enrichment map of differentially expressed genes of Mock
Detection
3.10. The Inhibitor PFT-α
Discussion
Full Text
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