Abstract

Burkholderia is a diverse and dynamic genus, containing pathogenic species as well as species that form complex interactions with plants. Pathogenic strains, such as B. pseudomallei and B. mallei, can cause serious disease in mammals, while other Burkholderia strains are opportunistic pathogens, infecting humans or animals with a compromised immune system. Although some of the opportunistic Burkholderia pathogens are known to promote plant growth and even fix nitrogen, the risk of infection to infants, the elderly, and people who are immunocompromised has not only resulted in a restriction on their use, but has also limited the application of non-pathogenic, symbiotic species, several of which nodulate legume roots or have positive effects on plant growth. However, recent phylogenetic analyses have demonstrated that Burkholderia species separate into distinct lineages, suggesting the possibility for safe use of certain symbiotic species in agricultural contexts. A number of environmental strains that promote plant growth or degrade xenobiotics are also included in the symbiotic lineage. Many of these species have the potential to enhance agriculture in areas where fertilizers are not readily available and may serve in the future as inocula for crops growing in soils impacted by climate change. Here we address the pathogenic potential of several of the symbiotic Burkholderia strains using bioinformatics and functional tests. A series of infection experiments using Caenorhabditis elegans and HeLa cells, as well as genomic characterization of pathogenic loci, show that the risk of opportunistic infection by symbiotic strains such as B. tuberum is extremely low.

Highlights

  • The genus Burkholderia encompasses a wide range of species, including human pathogens listed as potential bioterrorist threats, opportunistic human and plant pathogens, and beneficial plant symbionts that fix nitrogen in legume root nodules

  • The goal of this report is to characterize the members of the A group more fully and propose that they be used as replacements for the opportunistic, pathogenic Burkholderia species, namely the BCC, which had been recommended for agricultural use or are already employed in some countries as inocula or biocontrol agents (BCA)

  • The genus Burkholderia is a large group of bacteria composed of more than 70 species living in diverse habitats

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Summary

Introduction

The genus Burkholderia encompasses a wide range of species, including human pathogens listed as potential bioterrorist threats, opportunistic human and plant pathogens, and beneficial plant symbionts that fix nitrogen in legume root nodules. Characteristics that benefit rhizosphere bacteria, such as ecological and nutritional flexibility, antibiotic resistance, root adherence, biofilm formation, osmotolerance, and competition for mineral nutrients may contribute to the virulence of opportunistic pathogens [1], phylogenetic evidence distinguishes the true symbionts from the opportunistic pathogens in Burkholderia [2,3]. Since it was removed from Pseudomonas ribosomal RNA group II and moved into Burkholderia in 1992 [4], the genus has undergone significant taxonomic changes, with several strains transferred to Ralstonia as early as 1995 [5].

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