Abstract

Escherichia (E.) coli is a fecal microbe that inhabits the intestines of endotherms (primary habitat) and the natural environment (secondary habitats). Due to prevailing thinking regarding the limited capacity of E. coli to survive in the environment, relatively few published investigations exist regarding environmental factors influencing E. coli’s survival. To help guide future research in this area, an overview of factors known to impact the survival of E. coli in the environment is provided. Notably, the lack of historic field-based research holds two important implications: (1) large knowledge gaps regarding environmental factors influencing E. coli’s survival in the environment exist; and (2) the efficacy of implemented management strategies have rarely been assessed on larger field scales, thus leaving their actual impact(s) largely unknown. Moreover, the persistence of E. coli in the environment calls into question its widespread and frequent use as a fecal indicator microorganism. To address these shortcomings, future work should include more field-based studies, occurring in diverse physiographical regions and over larger spatial extents. This information will provide scientists and land-use managers with a new understanding regarding factors influencing E. coli concentrations in its secondary habitat, thereby providing insight to address problematic fecal contamination effectively.

Highlights

  • Escherichia coli (E. coli) is a fecal indicator microbe with a life history that cycles between two principal habitats, intestines of endotherms and environmental water, sediment, and soils

  • The objective of this review is to provide an overview of factors currently understood to affect E. coli lifecycles and concentrations in the secondary habitat, including how those factors can be used to predict E. coli population changes quantitatively

  • Given the health risks posed by the consumption of E. coli contaminated stream water and the bacteria’s widespread use as a fecal indicator organism, understanding the survival of this microbe in the environment is important from a human health perspective

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Summary

Introduction

Escherichia coli (E. coli) is a fecal indicator microbe with a life history that cycles between two principal habitats, intestines of endotherms (primary habitat) and environmental water, sediment, and soils (secondary habitats) These habitats differ markedly with respect to physical conditions (e.g., temperature) and nutrient availability [1]. Recent investigations have reported on the ability of E. coli to persist (survive and reproduce) in the environment for extended periods, thereby increasing the risk of colonizing a new host This shift in the understanding of the persistence of E. coli in the secondary habitat implies that there may be ample time for the microbe to become naturalized into the soil microbiome [13]. The review includes the identification of research needs and future directions regarding the survival of E. coli in the secondary habitat

Temperature
Solar Insolation
Suspended and Settled Solids
Hydrologic Conditions
Water Chemistry
Nutrients and Nutrient Availability
Land-Use Practices
Mitigation Strategies
Future Directions
Findings
Conclusions
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