Abstract

Mini-chromosome Maintenance (MCM) proteins play an essential role in both initiation and elongation phases of DNA replication in Eukarya. Genes encoding MCM homologs are present also in the genomic sequence of Archaea and the MCM-like protein from the euryarchaeon Methanobacterium thermoautotrophicum (Mth MCM) was shown to possess a robust ATP-dependent 3'-5' DNA helicase activity in vitro. Herein, we report the first biochemical characterization of a MCM homolog from a crenarchaeon, the thermoacidophile Sulfolobus solfataricus (Sso MCM). Gel filtration and glycerol gradient centrifugation experiments indicate that the Sso MCM forms single hexamers (470 kDa) in solution, whereas the Mth MCM assembles into double hexamers. The Sso MCM has NTPase and DNA helicase activity, which preferentially acts on DNA duplexes containing a 5'-tail and is stimulated by the single-stranded DNA binding protein from S. solfataricus (Sso SSB). In support of this functional interaction, we demonstrated by immunological methods that the Sso MCM and SSB form protein.protein complexes. These findings provide the first in vitro biochemical evidence of a physical/functional interaction between a MCM complex and another replication factor and suggest that the two proteins may function together in vivo in important DNA metabolic pathways.

Highlights

  • Mini-chromosome Maintenance (MCM)1 genes (MCM 2, 3, 4, 5, 6, 7) were originally identified in budding and fission yeast by a genetic analysis of mutants which were unable to efficiently replicate mini-chromosomes [1, 2]

  • An important clue to the in vivo function of the MCM proteins derived from the recent biochemical characterization of the single MCM homolog from the euryarchaeon Methanobacterium thermoautotrophicum (Mth MCM)

  • Identification, purification, and hydrodinamic properties of the Sso MCM - The analysis of the S. solfataricus genomic sequence revealed the presence of a single open reading frame coding for a putative homolog of the eukaryotic MCM proteins (Sso MCM; 27)

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Summary

Introduction

Mini-chromosome Maintenance (MCM) genes (MCM 2, 3, 4, 5, 6, 7) were originally identified in budding and fission yeast by a genetic analysis of mutants which were unable to efficiently replicate mini-chromosomes [1, 2]. Mth MCM was demonstrated to form a ring-shaped double hexamer and to possess a robust and processive 3’-5’ DNA helicase activity in vitro [20,21,22] These findings reinforced the hypothesis that the MCM proteins may act as the helicase associated to the replication fork, there is no direct evidence that Mth MCM is required in vivo for chromosome duplication [23]. These studies once again evidentiated that Archaea possess a replication machinery that is in several instances a simplified version of the eukaryotic counterpart and the biochemical characterization of the replication proteins from these peculiar organisms could provide an useful model to elucidate the molecular mechanisms of replication initiation, as well as replisome assembly and progression, in a context devoid of the eukaryotic regulatory complexities [24]. The Archaea domain is composed of two subdomains: Euryarchaeotes

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