Abstract
Multiparametric flow cytometry (MFC) represents a rapid, highly reproducible, and sensitive diagnostic technology for primary immunodeficiencies (PIDs), which are characterized by a wide range of T cell perturbations and a broad clinical and genetic heterogeneity. MFC data from CD4+ and CD8+ T cell subsets were examined in 100 patients referred for Primary Immunodeficiencies to our center. Naïve, central memory, effector memory, and terminal effector memory cell differentiation stages were defined by the combined expression CD45RA/CD27 for CD4 and CD45RA/CCR7 for CD8. Principal component analysis (PCA), a non-hypothesis driven statistical analysis, was applied to analyze MFC data in order to distinguish the diverse PIDs. Among severe lymphopenic patients, those affected by severe combined and combined immunodeficiency (SCID and CID) segregated in a specific area, reflecting a homogenous, and a more severe T cell impairment, compared to other lymphopenic PID, such as thymectomized and partial DiGeorge syndrome patients. PID patients with predominantly antibody defects were distributed in a heterogeneous pattern, but unexpectedly PCA was able to cluster some patients' resembling CID, hence warning for additional and more extensive diagnostic tests and a diverse clinical management. In conclusion, PCA applied to T cell MFC data might help the physician to estimate the severity of specific PID and to diversify the clinical and diagnostic approach of the patients.
Highlights
Primary Immunodeficiencies Disorders (PIDs) are a heterogeneous group of congenital disorders, caused by defects in development and/or function of the immune system, associated with an increased susceptibility to infections, immune-dysregulation, and a higher risk of malignancy [1, 2]
T subsets frequencies were diversely perturbed in most PIDs in univariate analysis, while those of STAT3, X-linked agammaglobulinemia (XLA), and selective IgA deficiency (SIgAD) patients were all comparable to healthy donors
T cell subsets frequencies were interrogated by principal component analysis (PCA): STAT3, XLA, and SIgAD groups did not show any evident alteration (Supplementary Figures S4A,B), with the exception of one SIgAD patient with severe autoimmune cytopenia clustering far from the SIgAD group (A13) and two XLA
Summary
Primary Immunodeficiencies Disorders (PIDs) are a heterogeneous group of congenital disorders, caused by defects in development and/or function of the immune system, associated with an increased susceptibility to infections, immune-dysregulation, and a higher risk of malignancy [1, 2]. Its impairment leads to a broad spectrum of immune diseases, Phenotypical T Cell Differentiation Analysis which require rapid and defined diagnosis in order to adopt the targeted therapeutic management. Severe combined immunodeficiency (SCID) are caused by a severe defect in T cells differentiation, variably associated with B cell, natural killer (NK) cell, and/or myeloid lineage impairment, with the first symptoms usually manifesting within the first year of life and the only curative therapy is represented by haematopoietic stem cell transplantation and/or gene therapy for defined diseases [4, 5]. Few observational studies on CID are in progress, a commonly accepted clinical and diagnostic management for these patients has not been defined yet, and it often relies on the local center expertise, rather than on evidence based systematic experiences [8, 9]. T cell subsets frequencies were investigated by principal component analysis (PCA) in order to test if this analysis could estimate the relative disease severity and could possibly support the clinical and diagnostic approach [16, 17]
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