Abstract

Although the list of proteins that localize to the bacterial cell poles is constantly growing, little is known about their temporal behavior. EI, a major protein of the phosphotransferase system (PTS) that regulates sugar uptake and metabolism in bacteria, was shown to form clusters at the Escherichia coli cell poles. We monitored the localization of EI clusters, as well as diffuse molecules, in space and time during the lifetime of E. coli cells. We show that EI distribution and cluster dynamics varies among cells in a population, and that the cluster speed inversely correlates with cluster size. In growing cells, EI is not assembled into clusters in almost 40% of the cells, and the clusters in most remaining cells dynamically relocate within the pole region or between the poles. In non-growing cells, the fraction of cells that contain EI clusters is significantly higher, and dispersal of these clusters is often observed shortly after exiting quiescence. Later, during growth, EI clusters stochastically re-form by assembly of pre-existing dispersed molecules at random time points. Using a fluorescent glucose analog, we found that EI function inversely correlates with clustering and with cluster size. Thus, activity is exerted by dispersed EI molecules, whereas the polar clusters serve as a reservoir of molecules ready to act when needed. Taken together our findings highlight the spatiotemporal distribution of EI as a novel layer of regulation that contributes to the population phenotypic heterogeneity with regard to sugar metabolism, seemingly conferring a survival benefit.

Highlights

  • The poles of rod-shaped bacterial cells play an important role in various molecular processes, including DNA segregation, metabolic regulation and aggregate clearance (Bowman et al, 2011; Govindarajan et al, 2012; Laloux and Jacobs-Wagner, 2014)

  • We verified that the activity of the chromosome-encoded EI-mCherry protein is comparable to that of the wild-type protein by comparing the growth rate of the strains expressing EI-mCherry or EI in minimal medium supplemented with phosphotransferase system (PTS) sugars or with a non-PTS sugar

  • The standard deviation intensity (SDI) in cells from sub-population (iii), which had big clusters after exiting quiescence, showed fluctuations with no consistent trend, maybe because big clusters are old and do not disperse completely, or because there is more noise in our measurements in this range. These results suggest that, unlike the abrupt event of cluster formation that occurs at random time points during the cell cycle, dispersal of EI from the cluster is a gradual process, which most cells are going through when exiting quiescence, it might not be completed, since in some cells EI molecules start to join the cluster before its complete dispersal

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Summary

INTRODUCTION

The poles of rod-shaped bacterial cells play an important role in various molecular processes, including DNA segregation, metabolic regulation and aggregate clearance (Bowman et al, 2011; Govindarajan et al, 2012; Laloux and Jacobs-Wagner, 2014). A handful of mechanisms have been suggested to underlie targeting of proteins to the poles. These include interaction with the polar anionic lipid cardiolipin, recognition of membrane domains with strong negative curvature, present in the poles and septa, and self-assembly in nucleoid-free. A classic example for proteins that exhibit pole-topole dynamics is the Escherichia coli MinCDE complex, which negatively regulates FtsZ polymerization at the poles and restricts Z-ring formation to mid-cell (Lutkenhaus, 2007). We found that the control center of the PTS system, which comprises the major PTS proteins EI and HPr, localizes to the cell poles of E. coli. EI cluster formation is an event that is stochastic in time, which generates phenotypic heterogeneity within a population

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