Abstract

Effective search strategies have evolved in many biological systems, including the immune system. T cells are key effectors of the immune response, required for clearance of pathogenic infection. T cell activation requires that T cells encounter antigen-bearing dendritic cells within lymph nodes, thus, T cell search patterns within lymph nodes may be a crucial determinant of how quickly a T cell immune response can be initiated. Previous work suggests that T cell motion in the lymph node is similar to a Brownian random walk, however, no detailed analysis has definitively shown whether T cell movement is consistent with Brownian motion. Here, we provide a precise description of T cell motility in lymph nodes and a computational model that demonstrates how motility impacts T cell search efficiency. We find that both Brownian and Lévy walks fail to capture the complexity of T cell motion. Instead, T cell movement is better described as a correlated random walk with a heavy-tailed distribution of step lengths. Using computer simulations, we identify three distinct factors that contribute to increasing T cell search efficiency: 1) a lognormal distribution of step lengths, 2) motion that is directionally persistent over short time scales, and 3) heterogeneity in movement patterns. Furthermore, we show that T cells move differently in specific frequently visited locations that we call “hotspots” within lymph nodes, suggesting that T cells change their movement in response to the lymph node environment. Our results show that like foraging animals, T cells adapt to environmental cues, suggesting that adaption is a fundamental feature of biological search.

Highlights

  • Search has been extensively studied in biology, in ecology, to understand how animals search for food, mates and prey

  • T cells must encounter another type of immune cell called dendritic cells in the PLOS Computational Biology | DOI:10.1371/journal.pcbi

  • We show that the idealized search that most closely fits the observed efficiency of experimentally derived T cell search in lymph nodes (LNs) is the LogMCRW (Fig 3B), in keeping with complementary cumulative distribution function (CCDF) fits (Fig 2)

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Summary

Introduction

Search has been extensively studied in biology, in ecology, to understand how animals search for food, mates and prey. Similar to foraging animals, T cells of the immune system search for targets to mount an immune response. In order to initiate an effective immune response, naïve T cells must encounter and sample dendritic cells (DCs) bearing cognate antigen in lymph nodes (LNs). In the absence of infection, T cells continuously enter and exit LNs interacting with DCs. Upon infection, DCs present cognate antigen and provide stimulatory signals leading to T cell activation. T cell-DC interactions are required for naïve T cells to survive, activate and eventually clear infection as well as maintain immune memory [5,6,7]

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