Abstract

Continuing improvements in genetically encoded calcium indicators (GECIs) make imaging an increasingly attractive method to observe neural activity in the Drosophila brain. Two-photon imaging with GECIs allows calcium signals to be monitored in the entire adult fly central brain in vivo. It has recently become possible to perform two-photon imaging and electrophysiology in behaving flies during tethered flight (Maimon et al., Nat Neurosci 13:393–399, 2010) and walking (Seelig et al., Nat Methods 7:535–540, 2010). Here we elaborate on methods to perform two-photon calcium imaging with GCaMP, and GFP-/GCaMP-guided whole-cell patch clamp and loose-patch electrophysiological recordings in a head-fixed walking fly. We discuss how loose-patch recording can be used simultaneously with two-photon imaging to relate GECI signals to spiking activity in the central brain. Finally, we present a protocol for the loading and use of synthetic calcium dyes in combination with neurons labeled with a spectrally separated fluorescent marker to perform higher temporal resolution recordings from the central brain.

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