Abstract

PEGylation of antimicrobial peptides as a shielding tool that increases stability toward proteolytic degradation typically leads to concomitant loss of activity, whereas incorporation of ultrashort PEG-like amino acids (sPEGs) remains essentially unexplored. Here, modification of a peptide/β-peptoid hybrid with sPEGs was examined with respect to influence on hydrophobicity, antibacterial activity and effect on viability of mammalian cells for a set of 18 oligomers. Intriguingly, the degree of sPEG modification did not significantly affect hydrophobicity as measured by retention in reverse-phase HPLC. Antibacterial activity against both wild-type and drug-resistant strains of Escherichia coli and Acinetobacter baumannii (both Gram-negative pathogens) was retained or slightly improved (MICs in the range 2–16 µg/mL equal to 0.7–5.2 µM). All compounds in the series exhibited less than 10% hemolysis at 400 µg/mL. While the number of sPEG moieties appeared not to be clearly correlated with hemolytic activity, a trend toward slightly increased hemolytic activity was observed for analogues displaying the longest sPEGs. In contrast, within a subseries the viability of HepG2 liver cells was least affected by analogues displaying the longer sPEGs (with IC50 values of ~1280 µg/mL) as compared to most other analogues and the parent peptidomimetic (IC50 values in the range 330–800 µg/mL).

Highlights

  • Increased prevalence of multidrug-resistant (MDR) pathogens constitutes an escalating worldwide problem [1]

  • The antibacterial activity of peptidomimetics was tested against E. coli ATCC 25922, K. pneumoniae ATCC 13883, P. aeruginosa PAO1, A. baumannii ATCC 19606, S. aureus ATCC 29213, E. faecalis ATCC 29212, and four MDR strains from the NMI (National Medicines Institute, Warsaw, Poland) collection: E. coli NMI 3371/16: carbapenem-resistant, colistinsusceptible (CST-S), and NDM-1-positive; E. coli NMI 3898/15: tigecycline-susceptible (TGC-S, minimal inhibitory concentration (MIC) = 0.5), colistin-resistant (CST-R, MIC = 4; mcr1-positive), CMY-2-positive; P. aeruginosa NMI 7197/19: colistin-resistant (CST-R, MIC = 16; mcr-negative); A. baumannii NMI 3658/17: colistin-resistant (CST-R, MIC > 16; mcr-negative)

  • None of the compounds included in the present study possess activity against K. pneumoniae or E. faecalis, and against S. aureus only analogues displaying a few shorter sPEG moieties exhibited weak activity

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Summary

Introduction

Increased prevalence of multidrug-resistant (MDR) pathogens constitutes an escalating worldwide problem [1]. PEGylation with low-MW PEG chains has been used in prodrugs of AMPs and peptidomimetics, including apidaecin and oncocin [29,30], a short Arg-rich AMP derived from LL37 [31], and oligothioetheramides [32] Both for AMPs and peptide/peptoid hybrid oligomers, correlations between relatively high hydrophobicity and increased antibacterial and hemolytic activity have been found [33,34,35,36]. We investigated an extended series of closely related peptidomimetics, and it was found that compounds with a hydrophobicity below a certain threshold (which depends on the bacterial species) were devoid of antibacterial activity, while compounds with a hydrophobicity exceeding a limiting threshold lacked cell selectivity [17] This finding corroborates similar observations reported for peptoids and AMPs in earlier studies [16,37,38,39,40]. Oligomers were synthesized on a Rink amide polystyrene resin, followed by acidic cleavage from the resin and subsequent purification by preparative HPLC, which yielded the desired compounds as trifluoroacetic acid (TFA) salts

Introduction of Ultrashort PEG-Like Moieties
Introduction of sPEG Moieties
General Information
General Protocol for Manual Synthesis of Peptidomimetics
Estimation of Log D Values
Determination of Minimum Inhibitory Concentration
Determination of Hemolytic Activity
Determination of Antiproliferative Activity on HepG2 Cell Line
Conclusions
Findings
51. Phenomenex HPLC Part
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