Peckoltia compta, a new species of catfish from the Brazilian Amazon, rio Tapajos basin (Siluriformes: Loricariidae)

Rhamphichthys heleios, new species, is described from the Amazon Basin in Brazil, being known from lakes and channels associated with the floodplains of large rivers. The new species is readily distinguished from all other congeners by a unique color pattern, composed of a series of dark irregular rounded blotches along the lateral body surface over the lateral line, and by the absence of clearly formed saddles across the dorsum. Comments on the taxonomy and use of color pattern for the systematics of Rhamphichthys are made based on examination of extensive materials in museum collections, and a key to the species of the genus occurring in the Amazon Basin is provided. Rhamphichthys heleios, espécie nova, é descrita para a Bacia Amazônica no Brasil, sendo encontrada em lagos e canais juntos a planície de inundação de grandes rios. A espécie nova se diferencia das demais espécies de Rhamphichthys pelo seu padrão de colorido único que é composto por uma série de manchas escuras arredondadas na lateral do corpo ao longo da linha lateral e pela ausência de selas escuras no dorso. Comentários sobre a taxônomia e o uso do padrão de colorido na sistemática de Rhamphichthys são feitos basedo em uma extensa revisão de material em coleções e é fornecido uma chave de identificação das espécies do gênero da bacia amazônica.

A new species of Hyphessobrycon Durbin from the Paraná do Urariá system in Central Amazon region, Amazonas state, Brazil, is described. The new species is allocated into the Hyphessobrycon heterorhabdus species-group due to its color pattern, composed by a well-defined, horizontally elongated humeral blotch continuous with a conspicuous midlateral dark stripe that becomes blurred towards the caudal peduncle, and can be distinguished from all other species of the group by possessing humeral blotch and continuous midlateral stripe broad, occupying vertical height equivalent of two scale rows. A tricolored pattern composed dorsally by a red or reddish longitudinal stripe, a middle iridescent, golden or silvery longitudinal stripe, and ventrally by a variably-developed longitudinal dark stripe is identified as a putative additional character shared by the species of the Hyphessobrycon heterorhabdus species-group. The presence of bony hooks in all fins in mature males of some species of the Hyphessobrycon heterorhabdus species-group is also discussed.

More than 80% of available malaria rapid diagnostic tests (RDTs) are based on the detection of histidine-rich protein-2 (PfHRP2) for diagnosis of Plasmodium falciparum malaria. Recent studies have shown the genes that code for this protein and its paralog, histidine-rich protein-3 (PfHRP3), are absent in parasites from the Peruvian Amazon Basin. Lack of PfHRP2 protein through deletion of the pfhrp2 gene leads to false-negative RDT results for P. falciparum. We have evaluated the extent of pfhrp2 and pfhrp3 gene deletions in a convenience sample of 198 isolates from six sites in three states across the Brazilian Amazon Basin (Acre, Rondonia and Para) and 25 isolates from two sites in Bolivia collected at different times between 2010 and 2012. Pfhrp2 and pfhrp3 gene and their flanking genes on chromosomes 7 and 13, respectively, were amplified from 198 blood specimens collected in Brazil. In Brazil, the isolates collected in Acre state, located in the western part of the Brazilian Amazon, had the highest percentage of deletions for pfhrp2 25 (31.2%) of 79, while among those collected in Rondonia, the prevalence of pfhrp2 gene deletion was only 3.3% (2 out of 60 patients). In isolates from Para state, all parasites were pfhrp2-positive. In contrast, we detected high proportions of isolates from all 3 states that were pfhrp3-negative ranging from 18.3% (11 out of 60 samples) to 50.9% (30 out of 59 samples). In Bolivia, only one of 25 samples (4%) tested had deleted pfhrp2 gene, while 68% (17 out of 25 samples) were pfhrp3-negative. Among the isolates tested, P. falciparum pfhrp2 gene deletions were present mainly in those from Acre State in the Brazilian Amazon. These results indicate it is important to reconsider the use of PfHRP2-based RDTs in the western region of the Brazilian Amazon and to implement appropriate surveillance systems to monitor pfhrp2 gene deletions in this and other parts of the Amazon region.

A new species of Moenkhausia is described from tributaries of the lower Amazon basin, Pará State, Brazil. The new species is morphologically similar to Moenkhausia collettii, M. copei, and M. venerei by the presence of a dark horizontal stripe across the middle portion of the eye, a conspicuous slightly rounded humeral blotch, a dark longitudinal midlateral stripe and a dark stripe along the anal-fin base. However, the new species can be distinguished from M. collettii, M. copei, and M. venerei mainly by the number of cusps on the inner row of the premaxillary, maxillary and dentary teeth, and by the number of scales in transversal series above and below the lateral line.

Tropical ecosystems are often biodiversity hotspots, and invertebrates represent the main underrepresented component of diversity in large‐scale analyses. This problem is partly related to the scarcity of data widely available to conduct these studies and the lack of systematic organization of knowledge about invertebrates' distributions in biodiversity hotspots. Here, we introduce and analyze a comprehensive data compilation of Amazonian ant diversity. Using records from 1817 to 2020 from both published and unpublished sources, we describe the diversity and distribution of ant species in the Brazilian Amazon Basin. Further, using high‐definition images and data from taxonomic publications, we build a comprehensive database of morphological traits for the ant species that occur in the region. In total, we recorded 1067 nominal species in the Brazilian Amazon Basin, with sampling locations strongly biased by access routes, urban centers, research institutions and major infrastructure projects. Large areas where ant sampling is non‐existent represent about 52% of the basin and are concentrated mainly in the northern, southeastern and western Brazilian Amazon. We found that distance to roads is the main driver of ant sampling in the Amazon. Contrary to our expectations, morphological traits had lower predictive power in predicting sampling bias than purely geographic variables. However, when geographic predictors were controlled, habitat stratum and traits contribute to explain the remaining variance. More species were recorded in better‐sampled areas, but species richness estimation models suggest that areas in southern Amazonian edge forests are associated with especially high species richness. Our results represent the first trait‐based, large‐scale study for insects in Amazonian forests and a starting point for macroecological studies focusing on insect diversity in the Amazon Basin.

Aircraft measurements of peroxyacetyl nitrate (PAN) were performed for the first time over the Brazilian Amazon Basin during the wet season (April–May 1987) as part of the NASA Atmospheric Boundary Layer Experiment (ABLE 2B) expedition. In addition to tropical measurements, free tropospheric latitudinal profiles were also obtained during transit flights to and from Manaus, Brazil. Complementing PAN were measurements of NO, O3, CO, C2Cl4, radon, and a variety of other chemical and meteorological parameters. Over the Amazon Basin, PAN was present at a mixing ratio of 5 to 125 ppt. Despite strong local and regional convective activity, a distinct vertical structure with highest mixing ratios aloft was observed. Median PAN mixing ratios of 12, 20, and 48 ppt were present in the 0‐ to 2‐, 2‐ to 4‐, and 4‐ to 6‐km height intervals, respectively. Data collected during the cross‐basin flights showed that the PAN mixing ratio was highest over the rain forest and declined eastward toward the Atlantic Ocean. Over the Atlantic, PAN was low and appeared to be uniformly distributed with height. Above the Amazon forest, PAN was as much as 5 times more abundant than NOx with the largest PAN/NOx ratios occurring at the highest altitudes. Both PAN and possibly the PAN/NOx ratio showed a latitudinal dependence, with decreasing values from the northern midlatitudes to the tropics. Free tropospheric (4–6 km) PAN mixing ratios were found to be strongly correlated with those of O3. Preliminary modeling results indicate that a sizeable fraction of NOx and HNO3 in the free troposphere could result from PAN decomposition alone. The primary source of free tropospheric PAN observed over the Amazon Basin is not well understood. Large‐scale transport from the upper tropospheric PAN reservoir present at the higher northern latitudes, and precursor emissions of nonmethane hydrocarbons from the forest and NOx from soil and lightning clearly play an important role.

Association between PM2.5 and respiratory hospitalization in Rio Branco, Brazil: Demonstrating the potential of low-cost air quality sensor for epidemiologic research.

The species currently assigned to the South American electric fish genus Porotergus are reviewed. Porotergus duende, a new species, is described from the lowland western Amazon basin in Brazil and Peru. Porotergus gimbeli from the lowland Amazon basin in Brazil and Peru, and P. gymnotus from the Essequibo drainage of Guyana are redescribed. Porotergus duende and P. gimbeli are restricted to deep channel habitats. Porotergus gymnotus occurs in shallow rivers. Notes on the ecology and electric organ discharge of P. duende and P. gimbeli are presented. A key to the members of the genus is provided.

Country- and ethnicity-specific reference values for echocardiographic parameters are necessary for decision making. No prior studies have examined reference values in adults from the Amazon Basin of Brazil. We performed echocardiographic examinations in 290 healthy adults (mean age 37 ± 14 years, 40% male) from the Brazilian Amazon. Left ventricular (LV) dimensions and volumes were obtained and indexed to body surface area. We also assessed systolic (LV ejection fraction [LVEF] and global longitudinal strain [GLS]) and diastolic function. LV dimensions and volumes were larger in males compared to females, but after indexation only volumes remained larger (P < 0.001 for all). Parameters of systolic function, were significantly greater in females (LVEF 50 to 68%, GLS - 17 to - 24%) than in males (LVEF 50 to 67%, GLS - 15 to - 23%, P < 0.05). Upper limits of normality for cardiac dimensions (indexed and non-indexed) were markedly higher compared to contemporary guidelines (American Society of Echocardiography) and the Brazilian subgroup in the World Alliance Society of Echocardiography (WASE). Lower limit of normality for LVEF (both sex 50%) and upper limit of normality for the left atrial volume index (LAVI) (male: 31 mL/m2, female: 25 mL/m2) were within normal range but slightly lower compared to guidelines and the WASE study. Other diastolic parameters, including E/A-ratio, E/e' ratio and peak tricuspid regurgitation velocity were compatible with present recommendations. Normal reference ranges of echocardiographic parameters in healthy adults from the Brazilian Amazon Basin may be different compared to international guidelines and data from other regions of Brazil. This applies specifically for LVEF and LAVI.

ObjectivePrior studies have suggested that self-rated health may be a useful indicator of cardiovascular disease. Consequently, we aimed to assess the relationship between self-rated health, cardiovascular risk factors and subclinical...

Primate visual cortical area 18 (visual area 2), when stained for the enzyme cytochrome oxidase, shows a pattern of alternating dark and light stripes; in squirrel monkeys, the dark stripes are clearly of 2 alternating types, thick and thin. We have recorded from these 3 subdivisions in macaques and squirrel monkeys, and find that each has distinctive physiological properties: (1) Cells in one set of dark stripes, in squirrel monkeys the thin stripes, are not orientation-selective; a high proportion show color-opponency. (2) Cells in the other set of dark stripes (thick stripes) are orientation-selective; most of them are also selective for binocular disparity, suggesting that they are concerned with stereoscopic depth. (3) Cells in the pale stripes are also orientation-selective and more than half of them are end-stopped. Each of the 3 subdivisions receives a different input from area 17: the thin stripes from the blobs, the pale stripes from the interblobs, the thick stripes from layer 4B. The pale stripes are thus part of the parvocellular system, and the thick stripes part of the magnocellular system. The physiological properties of the cells in the thin and pale stripes reflect the properties of their antecedent cells in 17, but nevertheless exhibit differences that suggest the kinds of processing that might occur at this stage.

A new Astyanax species is described from several localities in the rio Negro, rio Solimões and lower rio Tapajós basins, Amazon basin, Brazil. The new species is distinguished from all remaining characids by its unique color pattern consisting of the combination of presence of a conspicuous, narrow dark midlateral stripe, a well-developed vertically-elongated dark humeral spot, and upper caudal-fin lobe and middle caudal-fin rays dark, with a rounded clear ocellated spot present at anterior third of caudal-fin lobe.

Pasture development has become the largest anthropogenic disturbance of forest land in the Amazon basin (Skole et al. 1994, Serrão and Toledo 1990). The area of forests converted to cattle pasture in Amazonia is currently estimated at approximately 20 million hectares. In the Brazilian Amazon basin, most of the conversion of forest land to pasture began during the early 1960s to the late 1980s, as a consequence of the opening of Amazon highways and government policies aimed at regional development (Hecht 1982, Nepstad et al. 1991, Serrão et al. 1979). Pasture productivity and longevity in the Amazon basin seem to be closely related to soil fertility and nutrient cycling (e.g., Dias Filho and Serrão 1987, Serrão et al. 1979). Thus, understanding the major biogeochemical cycles that influence soil fertility under pasture is vital for predicting the consequences of continued conversion of tropical forests to cattle pastures. This understanding is also important for devising management technologies that enhance the sustainability of these areas and thus slow further deforestation. Although during the first three to five years after establishment, the productivity of pastures is often good, after that period a rapid decline in productivity of the planted grasses associated with an increased presence of herbaceous and woody invaders is generally observed (reviewed by Serrão and Toledo 1990). If left uncontrolled, these invader species slowly become dominant and lead to “pasture degradation,” a condition characterized by a complete dominance of the weedy community. If left to secondary succession, forest vegetation usually becomes reestablished on these degraded pasture lands in the Amazon, although the species composition is usually different than that of the primary forest (Nepstad 1989). The nutrient status of the degraded pasture soils is among the factors that affect the rate of regrowth of the secondary forests. One of the first attempts to study soil nutrient dynamics under cultivated pastures in the Amazon basin was conducted in the early 1970s by Falesi (1976). The results of that chronosequence study in different soil types suggested that soil nutrient cycling in pastures differed from that of the traditional slash-and-burn agriculture.

We used a process‐based model of ecosystem biogeochemistry (MBL‐GEM) to evaluate the effects of global change on carbon (C) storage in mature tropical forest ecosystems in the Amazon Basin of Brazil. We first derived a single parameterization of the model that was consistent with all the C stock and turnover data from three intensively studied sites within the Amazon Basin that differed in temperature, rainfall, and cloudiness. The range in temperature, soil moisture, and photosynthetically active radiation (PAR) among these sites is about as large as the anticipated changes in these variables in the tropics under CO2‐induced climate change. We then tested the parameterized model by predicting C stocks along a 2400‐km transect in the Amazon Basin. Comparison of predicted and measured vegetation and soil C stocks along this transect suggests that the model provides a reasonable approximation of how climatic and hydrologic factors regulate present‐day C stocks within the Amazon Basin. Finally, we used the model to predict and analyze changes in ecosystem C stocks under projected changes in atmospheric CO2 and climate. The central hypothesis of this exercise is that changes in ecosystem C storage in response to climate and CO2 will interact strongly with changes in other element cycles, particularly the nitrogen (N) and phosphorus (P) cycles. We conclude that C storage will increase in Amazonian forests as a result of (1) redistribution of nutrients from soil (with low C:nutrient ratios) to vegetation (with high C:nutrient ratios), (2) increases in the C:nutrient ratio of vegetation and soil, and (3) increased sequestration of external nutrient inputs by the ecosystem. Our analyses suggest that C:nutrient interactions will constrain increases in C storage to a maximum of 63 Mg/ha during the next 200 years, or about 16% above present‐day stocks. However, it is impossible to predict how much smaller the actual increase in C storage will be until more is known about the controls on soil P availability. On the basis of these analyses, we identify several topics for further research in the moist tropics that must be addressed to resolve these uncertainties.

BackgroundYellow fever (YF) is endemic in the Brazilian Amazon Basin, and sporadic outbreaks take place outside the endemic area in Brazil. Since 2016, YF epidemics have been occurring in Southeast Brazil, with more than 1,900 human cases and more than 1,600 epizooties of non-human primates (NHPs) reported until April 2018. Previous studies have demonstrated that Yellow fever virus (YFV) causing outbreaks in 2017 formed a monophyletic group.Methodology/Principal findingsAiming to decipher the origin of the YFV responsible for the recent epidemics, we obtained nucleotide sequences of YFV detected in humans (n = 6) and NHPs (n = 10) from Minas Gerais state during 2017–2018. Next, we performed evolutionary analyses and discussed the results in the light of epidemiological records (official numbers of YFV cases at each Brazilian Federative unit, reported by the Brazilian Ministry of Health). Nucleotide sequences of YFV from Southeast Brazil from 2016 to 2018 were highly conserved and formed a monophyletic lineage (BR-YFV_2016/18) within the genotype South America I. Different clusters were observed within lineage BR-YFV_2016/18, one containing the majority of isolates (from humans and NHPs), indicating the sylvatic transmission of YFV. We also detected a cluster characterized by two synapomorphies (amino acid substitutions) that contained YFV only associated with NHP what should be further investigated. The topology of lineage BR-YFV_2016/18 was congruent with epidemiological and temporal patterns of the ongoing epidemic. YFV isolates detected in 2016, in São Paulo state were located in the most basal position of the lineage, followed by the isolates from Minas Gerais and Espírito Santo obtained in 2017 and 2018. The most recent common ancestor of the lineage BR-YFV_2016/18 dated to 2015 (95% credible intervals = 2014–2016), in a period that was coincident with the reemergence of YFV in the Midwest region of Brazil.ConclusionsThe results demonstrated a single introduction of YFV in the Southeast region and the silent viral circulation before the onset of the outbreaks in 2016. Evolutionary analyses combined with epidemiological records supported the idea that BR-YFV_2016/18 was probably introduced from the Midwest into the Southeast region, possibly in São Paulo state. The persistence of YFV in the Southeast region, causing epidemics from 2016 to 2018, suggests that this region presents suitable ecological and climatic conditions for YFV maintenance during the epidemic and interepidemic seasons. This fact poses risks for the establishing of YF enzootic cycles and epidemics, outside the Amazon Basin in Brazil. YF surveillance and studies of viral dynamics deserve particular attention, especially in Midwest, Southeast and neighbor regions which are the main areas historically associated with YF outbreaks outside the Amazon Basin. YFV persistence in Southeast Brazil should be carefully considered in the context of public health, especially for public health decision-makers and researchers.