Abstract

Cellular differentiations are often regulated by bistable switches resulting from specific arrangements of multiple positive feedback loops (PFL) fused to one another. Although bistability generates digital responses at the cellular level, stochasticity in chemical reactions causes population heterogeneity in terms of its differentiated states. We hypothesized that the specific arrangements of PFLs may have evolved to minimize the cellular heterogeneity in differentiation. In order to test this we investigated variability in cellular differentiation controlled either by parallel or serial arrangements of multiple PFLs having similar average properties under extrinsic and intrinsic noises. We find that motifs with PFLs fused in parallel to one another around a central regulator are less susceptible to noise as compared to the motifs with PFLs arranged serially. Our calculations suggest that the increased resistance to noise in parallel motifs originate from the less sensitivity of bifurcation points to the extrinsic noise. Whereas estimation of mean residence times indicate that stable branches of bifurcations are robust to intrinsic noise in parallel motifs as compared to serial motifs. Model conclusions are consistent both in AND- and OR-gate input signal configurations and also with two different modeling strategies. Our investigations provide some insight into recent findings that differentiation of preadipocyte to mature adipocyte is controlled by network of parallel PFLs.

Highlights

  • Cellular heterogeneity is a natural phenomenon where an isogenic population of cells in homogeneous environmental conditions generate significant variability in cellular content, shape, size, cell cycle duration and stimuli responses[1, 2]

  • Cellular functions are regulated by chemical reaction networks with distinct steady state and dynamical properties

  • Since in many cases chemical noise is known to act as nuisance to the cellular behavior, the system’s obvious tendency would be to adopt a network that helps minimize the effects of chemical noise

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Summary

Introduction

Cellular heterogeneity is a natural phenomenon where an isogenic population of cells in homogeneous environmental conditions generate significant variability in cellular content, shape, size, cell cycle duration and stimuli responses[1, 2]. The origin of such heterogeneity has been found to be primarily due to the inevitable intrinsic[3,4,5] and extrinsic[6,7,8,9,10,11] sources of variabilities collectively known as chemical noise. The chemical noise can either cause a nuisance in various cellular phenomena such as cell cycle[12], apoptosis[13], p53 dynamics[14], HIV virus latency/replication[15, 16], aneuploidy[17] or it can help cell

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