Abstract

Responses to EGFR targeted therapy are generally temporary due to evitable drug resistance. The prevalence and characteristics of receptor tyrosine kinase (RTK) fusions as acquired resistance to EGFR-TKIs are rarely investigated. We retrospectively reviewed genomic profiling data of 3873 EGFR (exon 18-21)-mutant lung cancer patients with more than once NGS detection. A total of 16 patients who acquired RTK fusions during EGFR-TKI treatment with paired pre- and post- EGFR-TKI samples were identified. Their treatment history was collected. The newly acquired RTK fusions during EGFR-TKI treatment included RET (n = 6, 37.5%), ALK (n = 5, 31.3%), NTRK1 (n = 4, 25.0%), ROS1 (n = 1, 6.3%) and FGFR3 (n = 1, 6.3%). All the RET and EML4-ALK fusions were uncommon variants non-KIF5B-RET and E2:A20 (V5), respectively. Interestingly, RET fusion occurred only after osimertinib treatment, and contributed to drug resistance in 50.0% (6/12) of patients treated with osimertinib, indicating that fusions had different prevalence when functioned as resistance mechanisms to EGFR-TKI. Moreover, we found that in all patients developing drug resistance to EGFR-TKIs due to fusion emergence (n=16), those had treatment history of third-generation EGFR-TKI accounted for 75.0% (n=12). We extended the current knowledge of resistance mechanisms to EGFR-TKIs in non-small cell lung cancer. Detection of RTK fusions should be included in genomic profiling panels to uncover potential resistance mechanism of EGFR-TKI which might inform therapeutic strategies such as combination therapy approaches to circumvent tumorigenesis.

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