Abstract

Pepper (Capsicum spp.) is one of the major vegetable crops grown worldwide largely appreciated for its economic importance and nutritional value. This crop belongs to the large Solanaceae family, which, among more than 90 genera and 2500 species of flowering plants, includes commercially important vegetables such as tomato and eggplant. The genus includes over 30 species, five of which (C. annuum, C. frutescens, C. chinense, C. baccatum, and C. pubescens) are domesticated and mainly grown for consumption as food and for non-food purposes (e.g., cosmetics). The main challenges for vegetable crop improvement are linked to the sustainable development of agriculture, food security, the growing consumers’ demand for food. Furthermore, demographic trends and changes to climate require more efficient use of plant genetic resources in breeding programs. Increases in pepper consumption have been observed in the past 20 years, and for maintaining this trend, the development of new resistant and high yielding varieties is demanded. The range of pathogens afflicting peppers is very broad and includes fungi, viruses, bacteria, and insects. In this context, the large number of accessions of domesticated and wild species stored in the world seed banks represents a valuable resource for breeding in order to transfer traits related to resistance mechanisms to various biotic stresses. In the present review, we report comprehensive information on sources of resistance to a broad range of pathogens in pepper, revisiting the classical genetic studies and showing the contribution of genomics for the understanding of the molecular basis of resistance.

Highlights

  • Pepper (Capsicum spp.) is a fruit vegetable originated in the American tropics and today widely consumed as fresh, dried, or processed products

  • Using the same RIL population, bulked segregant analysis (BSA) combined with Random Amplification of Polymorphic DNA (RAPD) and Amplified Fragment Length Polymorphism (AFLP) markers allowed to develop a co-dominant SCAR marker (SA133_4) linked to root rot resistance in the region of QTLs contributing to obtain a stable resistance on Chr 5 [66]

  • Phyto5SAR was in a region containing clusters of resistance genes (NBS-LRR) and a systemic acquired resistance-related gene (SAR 8.2A) both associated with plant defense responses

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Summary

Introduction

Pepper (Capsicum spp.) is a fruit vegetable originated in the American tropics and today widely consumed as fresh, dried, or processed products. Pepper is a rich source of health-promoting compounds with important nutraceutical and anticancer properties Despite this favorable trend, several pests and diseases threaten cultivation around the world representing a limiting factor for productivity [2]. Considering the increasing need for sustainable agriculture, the use of resistant plants represents the main strategy to protect pepper cultivation against biotic stresses [2,3,4]. Climate changes and the risk of a resistance breakdown, affect the durability of disease resistance, there is an urgent need to develop new resistant cultivars that can be adapted to varied pedoclimatic conditions In this frame, gene pyramiding strategies can allow the accumulation of resistance genes in a single genotype and creates more durable and broad-spectrum mechanisms [6]. The present review aims to provide comprehensive information on the sources of resistance to a broad range of pathogens of pepper, revisiting the classical genetic studies and showing the contribution of genomics for the understanding of the molecular basis of resistance

Powdery Mildew
Phytophthora Root Rot and Foliar Blight
Anthracnose or Ripe Rot of Pepper
Vascular Diseases
Bacterial Wilt
Thrips-Transmitted Viruses
Cucumoviruses
Begomoviruses
Crinivirus
Viruses Transmitted by Contact
Pollen Transmitted Viruses
Arthropods and Nematode Pests
Thrips
Lepidopterous and Leaf Miner Pests
Broad Mites
Root-knot Nematodes
Findings
Impact of Genomics and Future Challenges in Plant Disease Research
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