Abstract

UVC irradiation-caused DNA lesions are repaired in mammalian cells solely by nucleotide excision repair (NER), which consists of sequential events including initial damage recognition, dual incision of damage site, gap-filling, and ligation. We have previously shown that gap-filling during the repair of UV-induced DNA lesions may be delayed by a subsequent treatment of oxidants or prooxidants such as hydrogen peroxide, flavonoids, and colcemid. We considered the delay as a result of competition for limiting protein/enzyme factor(s) during repair synthesis between NER and base excision repair (BER) induced by the oxidative chemicals. In this report, using colcemid as oxidative stress inducer, we showed that colcemid-caused delay of gap-filling during the repair of UV-induced DNA lesions was attenuated by overexpression of PCNA but not ligase-I. PCNA knockdown, as expected, delayed the gap-filling of NER but also impaired the repair of oxidative DNA damage. Fen-1 knockdown, however, did not affect the repair of oxidative DNA damage, suggesting repair of oxidative DNA damage is not of long patch BER. Furthermore, overexpression of XRCC1 delayed the gap-filling, and presumably increase of XRCC1 pulls PCNA away from gap-filling of NER for BER, consistent with our hypothesis that delay of gap-filling of NER attributes the competition between NER and BER.

Highlights

  • UVC irradiation or numerous carcinogenic chemicalscaused DNA adducts are repaired by nucleotide excision repair (NER)

  • We have previously shown that oxidants such as hydrogen peroxide, menadione, and other chemicals including colcemid, amoxicillin, and flavonoids of propolis can inhibit gap-filling during the repair of UVC-induced DNA lesions [3]

  • The % gap remaining was calculated from the ratio between the level of DNA breaks detected at a certain time following hydroxyurea and μM Ara-C (H/A) removal and the level of DNA breaks detected immediately before removal of H/A

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Summary

Introduction

UVC irradiation or numerous carcinogenic chemicalscaused DNA adducts are repaired by nucleotide excision repair (NER). We have linked the repair of oxidative DNA damage, that is, base excision repair (BER), with the delay of gap-filling [3]. To measure oxidative DNA adducts with the alkaline comet assay, we performed an additional step immediately after the cell lysis step, that is, incubating the slides containing the nucleoids with Endo III and Fpg (from Trevigen Co.; 2 units of each enzyme per slide in buffer with 10 mM Tris-HCl pH 7.4) as described previously [9].

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