Optimizing MRF-ASL scan design for precise quantification of brain hemodynamics using neural network regression.

Abstract

Arterial Spin Labeling (ASL) is a quantitative, non-invasive alternative for perfusion imaging that does not use contrast agents. The magnetic resonance fingerprinting (MRF) framework can be adapted to ASL to estimate multiple physiological parameters simultaneously. In this work, we introduce an optimization scheme to increase the sensitivity of the ASL fingerprint. We also propose a regression based estimation framework for MRF-ASL. To improve the sensitivity of MRF-ASL signals to underlying parameters, we optimized ASL labeling durations using the Cramer-Rao Lower Bound (CRLB). This paper also proposes a neural network regression based estimation framework trained using noisy synthetic signals generated from our ASL signal model. We tested our methods in silico and in vivo, and compared with multiple post labeling delay (multi-PLD) ASL and unoptimized MRF-ASL. We present comparisons of estimated maps for the six parameters of our signal model. The scan design process facilitated precise estimates of multiple hemodynamic parameters and tissue properties from a single scan, in regions of normal gray and white matter, as well as regions with anomalous perfusion activity in the brain. In particular, there was a 86.7% correlation of perfusion estimates with the ground truth in silico, using our proposed techniques. In vivo, there was roughly a 7 fold improvement in the Coefficient of Variation (CoV) for white matter perfusion, and 2 fold improvement in gray matter perfusion CoV in comparison to a reference Multi PLD method. The regression based estimation approach provided perfusion estimates rapidly, with estimation times of around 1s per map. Scan design optimization, coupled with regression-based estimation is a powerful tool for improving precision in MRF-ASL.