Abstract

Abstract. Canopy structural and leaf photosynthesis parameterizations such as maximum carboxylation capacity (Vcmax), slope of the Ball–Berry stomatal conductance model (BBslope) and leaf area index (LAI) are crucial for modeling plant physiological processes and canopy radiative transfer. These parameters are large sources of uncertainty in predictions of carbon and water fluxes. In this study, we develop an optimal moving window nonlinear Bayesian inversion framework to use the Soil Canopy Observation Photochemistry and Energy fluxes (SCOPE) model for constraining Vcmax, BBslope and LAI with observations of coupled carbon and energy fluxes and spectral reflectance from satellites. We adapted SCOPE to follow the biochemical implementation of the Community Land Model and applied the inversion framework for parameter retrievals of plant species that have both the C3 and C4 photosynthetic pathways across three ecosystems. We present comparative analysis of parameter retrievals using observations of (i) gross primary productivity (GPP) and latent energy (LE) fluxes and (ii) improvement in results when using flux observations along with reflectance. Our results demonstrate the applicability of the approach in terms of capturing the seasonal variability and posterior error reduction (40 %–90 %) of key ecosystem parameters. The optimized parameters capture the diurnal and seasonal variability in the GPP and LE fluxes well when compared to flux tower observations (0.95>R2>0.79). This study thus demonstrates the feasibility of parameter inversions using SCOPE, which can be easily adapted to incorporate additional data sources such as spectrally resolved reflectance and fluorescence and thermal emissions.

Highlights

  • Terrestrial ecosystems play a very important role in regulating the carbon exchange over land surfaces (Schimel, 1995; Falkowski et al, 2000)

  • We present an inversion approach which can be implemented with ecosystem models involving canopy physiological processes to better estimate the seasonal variability in photosynthesis and canopy structural parameters, which in turn can reduce the uncertainty in estimation of carbon and water fluxes over ecosystems

  • Our results demonstrate the feasibility of a moving window inversion approach for the retrieval of key ecosystem parameters using eddy covariance flux tower observations

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Summary

Introduction

Terrestrial ecosystems play a very important role in regulating the carbon exchange over land surfaces (Schimel, 1995; Falkowski et al, 2000). We present an inversion approach which can be implemented with ecosystem models involving canopy physiological processes to better estimate the seasonal variability in photosynthesis and canopy structural parameters, which in turn can reduce the uncertainty in estimation of carbon and water fluxes over ecosystems. Our hypothesis is that the inversion of a detailed vertically resolved canopy model such as SCOPE with multiple layers consisting of sunlit and shaded fractions together with fully spectrally resolved radiation regime and energy balance computations (van der Tol et al, 2009) is able to retrieve the ecosystem parameters accurately using observations of carbon and energy fluxes, and in the future remote sensing data, as SCOPE can model the spectrally resolved shortwave reflectance, thermal emission and solar-induced chlorophyll fluorescence.

SCOPE model
The SCOPE biochemical module
Comparison of current and previous photosynthesis implementations in SCOPE
Formulation of inverse problem
Linearization of the forward model
Iterative retrieval algorithm setup
Levenberg–Marquardt method
A moving window setup of the inversion problem using flux tower observations
Error characterization and convergence criteria for the retrievals
Results for implementing the inversion framework in SCOPE
Data filtering criteria in the moving window retrievals
MODIS satellite reflectance data
Site description
Inversion parameters and results
Inversion parameters and results for the year 2009
Inversion results for the year 2007
Discussion and conclusion
Findings
A-gs-Ci iterations
Full Text
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