Abstract

Deformable medical image registration plays a vital role in medical image applications, such as placing different temporal images at the same time point or different modality images into the same coordinate system. Various strategies have been developed to satisfy the increasing needs of deformable medical image registration. One popular registration method is estimating the displacement field by computing the optical flow between two images. The motion field (flow field) is computed based on either gray-value or handcrafted descriptors such as the scale-invariant feature transform (SIFT). These methods assume that illumination is constant between images. However, medical images may not always satisfy this assumption. In this study, we propose a metric learning-based motion estimation method called Siamese Flow for deformable medical image registration. We train metric learners using a Siamese network, which produces an image patch descriptor that guarantees a smaller feature distance in two similar anatomical structures and a larger feature distance in two dissimilar anatomical structures. In the proposed registration framework, the flow field is computed based on such features and is close to the real deformation field due to the excellent feature representation ability of the Siamese network. Experimental results demonstrate that the proposed method outperforms the Demons, SIFT Flow, Elastix, and VoxelMorph networks regarding registration accuracy and robustness, particularly with large deformations.

Highlights

  • Medical image registration refers to seeking one or a series of spatial transformations for a medical image to achieve spatial and anatomical position correspondence to another fixed image [1,2,3]

  • BrainWeb is a simulated brain database (SBD) produced by an MRI simulator and contains simulated brain MRI data based on two anatomical models: normal and multiple sclerosis (MS)

  • EMPIRE10 is a lung dataset that contains 30 clinical chest CT scans and their corresponding masks obtained using the lung segmentation method that was proposed by Rikxoorta et al [33]

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Summary

Introduction

Medical image registration refers to seeking one or a series of spatial transformations for a medical image (moving image) to achieve spatial and anatomical position correspondence to another fixed image [1,2,3]. Medical image registration can provide complementary information for accurate diagnosis and tumor treatment planning. Aligning a map of important anatomical structures to patient images provides useful guidance for preoperative and intraoperative planning in neurosurgery. Image registration technology is used to put studied patient images into a common coordinate system to study anatomical. Image registration is used to compensate for motion, such as breathing and cardiac motions, in dynamic images. In computer-aided diagnosis and radiation therapy, image registration plays an important role in aligning and tracking tumor growth in longitudinal images

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