Abstract
Background Adenosine to inosine (A-to-I) RNA editing is a widespread post-transcriptional RNA modification mainly located in repetitive Alu elements and mediated by the enzyme adenosine deaminase acting on RNA-1 (ADAR1). A-to-I RNA editing controls various aspects of RNA metabolism, which may affect tissue-specific gene expression. Although deregulation of RNA editing has been previously reported in various human diseases including cardiovascular disease and cancer (Stellos et al., Nat Med, 2017; Liu et al., Nat Med, 2019 and Ishizuka et al., Nature, 2019), its role in autoimmune diseases and especially in rheumatoid arthritis (RA) remains unknown. Objectives To study whether A-to-I RNA editing is involved in the pathogenesis of RA and to determine the impact of anti-rheumatic treatment on RNA editing. Methods We first analysed the expression of ADAR1 in 185 RA synovial tissues versus 76 healthy/osteoarthritic synovia derived from 4 independent RNA-sequencing and microarray datasets. We validated the findings in peripheral blood mononuclear cells (PBMCs) derived from 19 patients with active RA vs 14 controls and performed an additional ADAR1-isoform analysis (ADAR1p110/ADAR1p150) by RT-qPCR. Further, we studied in single nucleotide level the A-to-I RNA editing levels of the pro-inflammatory gene cathepsin S (CTSS) 3’-untranslated region (3’UTR), a matrix degradation enzyme which is a well-established target of ADAR1, by Alu Sanger sequencing and RNA editing analysis. Last, we examined the effect of anti-rheumatic treatment on RNA editing. Results Expression of the RNA editor ADAR1 was significantly increased in RA synovium compared to healthy or osteoarthritic synovium. Similarly, a significant increase of ADAR1, mainly due to an increase of the interferon-inducible ADAR1p150 isoform, was observed in PBMCs from active RA. Next, we studied the RNA editing levels in PBMCs from active RA patients before and after 12-week treatment versus controls. RNA editing of CTSS 3’UTR AluSx+ was increased in active RA (6-47% increase in editing rate of 8 individual adenosines, all P Conclusion ADAR1-mediated RNA editing is increased in active RA inducing the expression of pro-inflammatory genes thus representing a novel drug response biomarker and a potential therapeutic target in EULAR moderate/non-responders.
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