Abstract

Porcine circovirus type 3 (PCV3) is a recently discovered virus with potentially significant implications on the global swine industry. PCV3 replication involves the entry of the viral capsid (Cap) protein with nucleolar localization signals into the nucleus. Using liquid chromatography-mass spectrometry analysis, nucleolar phosphoprotein NPM1 was identified as one of the cellular proteins bound to PCV3 Cap. Co-immunoprecipitation demonstrated that PCV3 Cap interacts directly with NPM1, where the region binding with NPM1 is mapped to amino acid residues 1–38 of Cap. Upon co-transfection, the expression of Cap protein promoted the redistribution of NPM1, which translocated from the nucleus to the cytoplasm and colocalized with Cap in cultured PK15 cells. NPM1 expression was upregulated and translocated from the nucleus to the cytoplasm in PCV3-infected cells, upon siRNA-mediated depletion, or upon treatment with NPM1 inhibitor in PK15 cells with impaired PCV3 replication, as evidenced by decreased levels of viral DNA synthesis and protein expression. By contrast, the replication of PCV3 was enhanced in stably NPM1-expressing cells via a lentivirus-delivered system. Taken together, these findings indicate that NPM1 interacts with PCV3 Cap and plays a crucial role in PCV3 replication.

Highlights

  • Porcine circovirus (PCV), a member of the genus Circovirus of the family Circoviridae, is a non-enveloped, single-stranded, and closed-circular DNA virus with genomes of approximately 1.7–2.0 kb in length (Breitbart et al, 2017)

  • Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) Pathway Analysis of Cellular Proteins Interacting With Porcine circovirus type 3 (PCV3) capsid protein (Cap)

  • With regards to PCV3, a recent study found that the interaction of NPM1 with PCV3 Cap contributes to its nucleolar localization (Zhou et al, 2021)

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Summary

Introduction

Porcine circovirus (PCV), a member of the genus Circovirus of the family Circoviridae, is a non-enveloped, single-stranded, and closed-circular DNA virus with genomes of approximately 1.7–2.0 kb in length (Breitbart et al, 2017). The PCV3 genome contains three major open reading frames (ORFs), namely ORF1, ORF2, and ORF3, which encode replicase (Rep), structural capsid protein (Cap), and an unknown function ORF3 protein, respectively (Li et al, 2018). All PCVs possess a nuclear localization signal (NLS) at the N-terminus of the Cap protein (Liu et al, 2001; Shuai et al, 2008; Mou et al, 2019). The amino acids of the PCV3 Cap protein are significantly different from those of PCV1 and PCV2, their motifs within the NLSs share some similarities (Liu et al, 2001; Shuai et al, 2008; Mou et al, 2019)

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