Abstract
A synthetic biology approach to the rational design of analogues of olfactory ligands by providing unnatural substrates for the enzyme synthesising (S)-germacrene D, an olfactory ligand acting as a plant derived insect repellent, to produce novel ligands is described as a viable alternative to largely unsuccessful ligand docking studies. (S)-14,15-Dimethylgermacrene D shows an unexpected reversal in behavioural activity.
Highlights
A synthetic biology approach to the rational design of analogues of olfactory ligands by providing unnatural substrates for the enzyme synthesising (S)-germacrene D, an olfactory ligand acting as a plant derived insect repellent, to produce novel ligands is described as a viable alternative to largely unsuccessful ligand docking studies. (S)-14,15-Dimethylgermacrene D shows an unexpected reversal in behavioural activity
We test the hypothesis that, if a compound is accepted as an unnatural substrate by the enzyme that synthesises the natural ligand, the product is likely to demonstrate sufficient coverage of the chemical space associated with the natural ligand to be active
4a R1–R6 = H, R1–R6 = H for all others except as shown above. a Two products generated, one of which was 1b. b 15F-FDP gave multiple products that decomposed upon standing. c Percentage conversion and percentage conversion relative to natural substrate.[4] d Isolated yield after preparative scale incubation with GDS-Y406F. e Product was identified as 8-fluoro-a-humulene (5).[7] f Results from the electroantennograms are expressed as + = active, +++ = highly active. g Results from the olfactometer are expressed as À repellent, À À À highly repellent, +++ highly attractive, n/a = not active, n/t = not tested
Summary
A synthetic biology approach to the rational design of analogues of olfactory ligands by providing unnatural substrates for the enzyme synthesising (S)-germacrene D, an olfactory ligand acting as a plant derived insect repellent, to produce novel ligands is described as a viable alternative to largely unsuccessful ligand docking studies. (S)-14,15-Dimethylgermacrene D shows an unexpected reversal in behavioural activity. We test the hypothesis that, if a compound is accepted as an unnatural substrate by the enzyme that synthesises the natural ligand, the product is likely to demonstrate sufficient coverage of the chemical space associated with the natural ligand to be active.
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