Abstract

BackgroundBreast cancer is one of the major causes of mortalities noticed in women globally. DDX3 has emerged as a potent target for several cancers, including breast cancer to which currently there are no reported or approved drugs.MethodsTo find effective cancer therapeutics, three compounds were computationally designed tweaking the structure of natural compound butein. These compounds were synthesized and evaluated for their anticancer property in MCF-7 and MDA-MB-231 cell lines targeting DDX3. The in silico molecular docking studies have shown that the compounds have occupied the binding site of the human DDX3 target. Furthermore, to investigate the cell viability effect of 3a, 3b, and 3c on MCF-7 and MDA-MB-231 cell lines, the cell lines were treated with different concentrations of compounds for 24 and 48 h and measured using MTT assay.ResultsThe cell viability results showed that the have induced dose dependent suppression of DDX3 expression. Additionally, 3b and 3c have reduced the expression of DDX3 in MCF-7 and MDA-MD-231 cell lines. 3b or 3c treated cell lines increased apoptotic protein expression. Both the compounds have induced the apoptotic cell death by elevated levels of cleaved PARP and cleaved caspase 3 and repression of the anti-apoptosis protein BCL-xL. Additionally, they have demonstrated the G2/M phase cell cycle arrest in both the cell lines. Additionally, 3c decreased PI3K and AKT levels.ConclusionsOur results shed light on the anticancer ability of the designed compounds. These compounds can be employed as chemical spaces to design new prospective drug candidates. Additionally, our computational method can be adapted to design new chemical scaffolds as plausible inhibitors.

Highlights

  • RNA helicases are a group of proteins possessing a unique motif, called the DEAD/H (Asp-Glu-Ala-Asp/His) [1]

  • The gene DDX3X is present on the X-chromosome bands, p11.3– > p11.23 [2] and acts as a oncogene or tumor suppressor [1]

  • The role of DDX3 is noticed in several cancers [1], in the current study, we focused on breast cancer targeting two cell lines, MCF-7 and MDA-MB231, respectively

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Summary

Introduction

RNA helicases are a group of proteins possessing a unique motif, called the DEAD/H (Asp-Glu-Ala-Asp/His) [1]. DDX3 modulates the expression of genes at various levels It takes part in transcriptional regulation of gene promoters, engages in splicing, performs the nuclear export of RNA, demonstrates a role in translational regulation [3]. The residues from the Q motif, Arg202, and Gln207, hold the adenine group and the phosphate group is held by the P-loop residues, namely Gly227, Ser228, Gly229, Lys230, and Thr231 [2]. This binding site has been exploited widely by the researchers to design and discover new chemical compounds [4,5,6]. DDX3 has emerged as a potent target for several cancers, including breast cancer to which currently there are no reported or approved drugs

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