Abstract

Accurate assessment of positive ELISPOT responses for low frequencies of antigen-specific T-cells is controversial. In particular, it is still unknown whether ELISPOT counts within replicate wells follow a theoretical distribution function, and thus whether high power parametric statistics can be used to discriminate between positive and negative wells. We studied experimental distributions of spot counts for up to 120 replicate wells of IFN-γ production by CD8+ T-cell responding to EBV LMP2A (426 – 434) peptide in human PBMC. The cells were tested in serial dilutions covering a wide range of average spot counts per condition, from just a few to hundreds of spots per well. Statistical analysis of the data using diagnostic Q-Q plots and the Shapiro-Wilk normality test showed that in the entire dynamic range of ELISPOT spot counts within replicate wells followed a normal distribution. This result implies that the Student t-Test and ANOVA are suited to identify positive responses. We also show experimentally that borderline responses can be reliably detected by involving more replicate wells, plating higher numbers of PBMC, addition of IL-7, or a combination of these. Furthermore, we have experimentally verified that the number of replicates needed for detection of weak responses can be calculated using parametric statistics.

Highlights

  • IntroductionT-lymphocytes (TEM) via the detection of the cytokines that individual T-cells secrete

  • T-cell ELISPOT assays measure the antigen-induced reactivation of effector memoryT-lymphocytes (TEM) via the detection of the cytokines that individual T-cells secrete

  • Using statistical analysis of spot counts in large numbers of replicate wells, we have shown that

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Summary

Introduction

T-lymphocytes (TEM) via the detection of the cytokines that individual T-cells secrete. In this assay, each antigen-specific TEM cell leaves behind a cytokine footprint, in the form of a spot, which is visualized either by enzymatic or fluorescent means. In addition to testing the antigen-induced spots, the assay requires the inclusion of “medium control wells” as negative controls to establish spot counts when the cells are plated without antigen. Such spots can result from non-T-cells constitutively secreting the cytokine that needs to be distinguished from cognate antigen-induced cytokine production by T-cells. Cytokine storms in diseased individuals, can result in an elevated medium background, primarily resulting from cytokine production by cells of the innate immune system, such as macrophages, NK cells and dendritic cells

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