Abstract

Nonsyndromic familial non-medullary thyroid cancer (FNMTC) represents 3–9% of thyroid cancers, but the susceptibility gene(s) remain unknown. We designed this multicenter study to analyze families with nonsyndromic FNMTC and identify candidate susceptibility genes. We performed exome sequencing of DNA from four affected individuals from one kindred, with five cases of nonsyndromic FNMTC. Single Nucleotide Variants, and insertions and deletions that segregated with all the affected members, were analyzed by Sanger sequencing in 44 additional families with FNMTC (37 with two affected members, and seven with three or more affected members), as well as in an independent control group of 100 subjects. We identified the germline variant p. Asp31His in NOP53 gene (rs78530808, MAF 1.8%) present in all affected members in three families with nonsyndromic FNMTC, and not present in unaffected spouses. Our functional studies of NOP53 in thyroid cancer cell lines showed an oncogenic function. Immunohistochemistry exhibited increased NOP53 protein expression in tumor samples from affected family members, compared with normal adjacent thyroid tissue. Given the relatively high frequency of the variant in the general population, these findings suggest that instead of a causative gene, NOP53 is likely a low-penetrant gene implicated in FNMTC, possibly a modifier.

Highlights

  • Thyroid cancer (TC) is the most common endocrine cancer, with more than 54,000 new cases diagnosed every year in the USA

  • We did not find mutations in: genes previously described in syndromic familial non-medullary thyroid cancer (FNMTC) (APC, PTEN, WRN, DICER1 and PRKAR1A), rearranged genes (NTRK, PPARG), DNA repair genes (XRCC1, XRCC3), genes involved in the development of the thyroid gland (PAX8, JAG1, CDC42, GSTM1, GSTT1, SRGAP1, TERT, THRB, AKT1, SEC23B, ESR2, NKX2, TBL1X), genes previously described in the literature in nonsyndromic FNMTC (HABP2, TTF1, THADA, SEC23B, FOXE1, KLLN, MAP2K5), oncogenes (RET, MET, KIT, MERTK), nor genes that have been found in TC

  • We selected a kindred with five FNMTC-affected members (Kindred 1) to perform whole-exome sequencing (WES)

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Summary

Introduction

Thyroid cancer (TC) is the most common endocrine cancer, with more than 54,000 new cases diagnosed every year in the USA. Genes 2019, 10, 899 cancer (FNMTC) represents 3–9% of TCs [2]. Susceptibility genes involved in syndromic FNMTC are known: APC in familial adenomatous polyposis [MIM: 175100], PTEN in Cowden’s disease [MIM: 158350], PRKAR1A in Carney complex type 1 [MIM: 160980], WRN in Werner’s syndrome [MIM: 277700], and DICER1 in the DICER1 syndrome [MIM: 606241], [3]. Some studies have suggested that nonsyndromic FNMTC is more aggressive than sporadic non-medullary thyroid cancer [7]. Given the prevalence and aggressiveness of nonsyndromic FNTMC, it is crucial to identify the susceptibility genes involved

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