Abstract

Abstract. The contribution of photosynthesis and soil respiration to net land–atmosphere carbon dioxide (CO2) exchange can be estimated based on the differential influence of leaves and soils on budgets of the oxygen isotope composition (δ18O) of atmospheric CO2. To do so, the activity of carbonic anhydrases (CAs), a group of enzymes that catalyse the hydration of CO2 in soils and plants, needs to be understood. Measurements of soil CA activity typically involve the inversion of models describing the δ18O of CO2 fluxes to solve for the apparent, potentially catalysed, rate of CO2 hydration. This requires information about the δ18O of CO2 in isotopic equilibrium with soil water, typically obtained from destructive, depth-resolved sampling and extraction of soil water. In doing so, an assumption is made about the soil water pool that CO2 interacts with, which may bias estimates of CA activity if incorrect. Furthermore, this can represent a significant challenge in data collection given the potential for spatial and temporal variability in the δ18O of soil water and limited a priori information with respect to the appropriate sampling resolution and depth. We investigated whether we could circumvent this requirement by inferring the rate of CO2 hydration and the δ18O of soil water from the relationship between the δ18O of CO2 fluxes and the δ18O of CO2 at the soil surface measured at different ambient CO2 conditions. This approach was tested through laboratory incubations of air-dried soils that were re-wetted with three waters of different δ18O. Gas exchange measurements were made on these soils to estimate the rate of hydration and the δ18O of soil water, followed by soil water extraction to allow for comparison. Estimated rates of CO2 hydration were 6.8–14.6 times greater than the theoretical uncatalysed rate of hydration, indicating that CA were active in these soils. Importantly, these estimates were not significantly different among water treatments, suggesting that this represents a robust approach to assay the activity of CA in soil. As expected, estimates of the δ18O of the soil water that equilibrates with CO2 varied in response to alteration to the δ18O of soil water. However, these estimates were consistently more negative than the composition of the soil water extracted by cryogenic vacuum distillation at the end of the gas measurements with differences of up to −3.94 ‰ VSMOW–SLAP. These offsets suggest that, at least at lower water contents, CO2–H2O isotope equilibration primarily occurs with water pools that are bound to particle surfaces and are depleted in 18O compared to bulk soil water.

Highlights

  • Carbonic anhydrases (CAs) are a group of metalloenzymes, typically utilising either zinc (Hewett-Emmett and Tashian, 1996) or cadmium (Xu et al, 2008), which catalyse the reversible hydration of dissolved carbon dioxide (CO2)

  • We aimed to (1) confirm the suitability of this approach by testing whether δ18O signatures of soil–atmosphere (δR) and δa are linearly related in an experimental context, (2) compare estimates of δsw, eq determined from the gas flux measurements with δsw, ce measured for the extracted bulk soil water, and (3) compare the sensitivity of kiso estimates to variations in δsw

  • We have demonstrated that a strong linear correlation existed between δR and δa, suggesting that we should be able to derive kiso and δsw, eq from only two inlet conditions

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Summary

Introduction

Carbonic anhydrases (CAs) are a group of metalloenzymes, typically utilising either zinc (Hewett-Emmett and Tashian, 1996) or cadmium (Xu et al, 2008), which catalyse the reversible hydration of dissolved carbon dioxide (CO2). Spread amongst at least five unrelated classes, these enzymes have been identified in eukarya, bacteria and archaea (Gilmour, 2010) Such convergent evolution among diverse groups of organisms suggests that CAs are fundamental to many life strategies (Smith et al, 1999). These enzymes have been linked to a number of common and specialised biological processes, such as CO2 concentration mechanisms required to maintain photosynthesis in plants, algae and cyanobacteria (Badger, 2003; Badger and Price, 1994); calcification to limit calcium toxicity in bacteria (Banks et al, 2010; Li et al, 2005b); maintenance of required CO2. Despite evidence of CA activity in soils, the variability and drivers of their expression by soil communities is poorly understood (Li et al, 2005a; Seibt et al, 2006; Wingate et al, 2009, 2008)

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