Abstract

Bacteroides neonati strain MS4T, is the type strain of Bacteroides neonati sp. nov., a new species within the genus Bacteroides. This strain, whose genome is described here, was isolated from a premature neonate stool sample. B. neonati strain MS4T is an obligate anaerobic Gram-negative bacillus. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 5.03 Mbp long genome exhibits a G+C content of 43.53% and contains 4,415 protein-coding and 91 RNA genes, including 9 rRNA genes.

Highlights

  • Bacteroides neonati strain MS4T (= CSUR P 1500= DSM 26805), is the type strain of Bacteroides neonati sp. nov., and a new member of the genus Bacteroides. This bacterium is a Gram-negative, anaerobic, non spore-forming, indole positive bacillus that was isolated from a preterm neonate stool sample, during a study prospecting stool samples from patients with necrotizing enterocolitis and controls [unpublished]

  • We propose the description of a new bacterial species, using genome sequences, MALDI-TOF spectra, and the main phenotypic characteristics, as previously done [522]

  • On the basis of phenotypic, phylogenetic and genomic analysis, we formally propose the creation of Bacteroides neonati that contains the strain MS4T

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Summary

Introduction

Bacteroides neonati strain MS4T (= CSUR P 1500= DSM 26805), is the type strain of Bacteroides neonati sp. nov., and a new member of the genus Bacteroides. To define a new bacterial species or genus, the “gold standard” method is the DNA-DNA hybridization and G+C content determination [1]. Those methods are expensive, and poorly reproducible. Strain MS4T (= CSUR P 1500= DSM 26805) together with a description of the complete genomic sequencing and annotation. These characteristics support the circumscription of a novel species, B. neonati sp. The Bacteroidaceae family is currently comprised of 3 genera: Acetomicrobium, Anaerorhabdus and Bacteroides It is a heterogeneous family, grouping anaerobic and morphologically variable bacteria, and it is defined mainly on the basis of phylogenetic analyses of 16S rDNA sequences. Bacteroides neonati is a strictly anaerobic Gram negative, non spore-forming bacterium

Classification and features
Stool sample
Utilization of Glucose
Distance Level
Genome sequencing and annotation samples from patients with necrotizing
Growth conditions and DNA isolation
Genome sequencing and assembly
Genome annotation
Genome properties
Insights into the genome sequence
COG description
Findings
Conclusion
Full Text
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