Abstract

It is widely believed that, in molecular dynamics (MD) simulations, round-off errors can cause numerical irreversibility since, in the standard MD, floating-point real number arithmetic is employed and round-off errors cannot be avoided. To investigate the characteristic of this numerical irreversibility, the ‘bit-reversible algorithm’, which is completely time-reversible and is free from any round-off error, is made use of as a test bed. Through this study, it is clearly demonstrated that, other than the extent of the stability of the system, the appearance of irreversibility is related to the ‘ quantity’ of the controlled noise. By means of the bit-reversible simulation added to the controlled noise of an appropriate ‘ quantity’, the characteristic of the numerical irreversibility in the standard MD is revealed.

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