Abstract

BackgroundThe legume-rhizobium symbiosis requires the formation of root nodules, specialized organs where the nitrogen fixation process takes place. Nodule development is accompanied by the induction of specific plant genes, referred to as nodulin genes. Important roles in processes such as morphogenesis and metabolism have been assigned to nodulins during the legume-rhizobium symbiosis.ResultsHere we report the purification and biochemical characterization of a novel nodulin from common bean (Phaseolus vulgaris L.) root nodules. This protein, called nodulin 41 (PvNod41) was purified through affinity chromatography and was partially sequenced. A genomic clone was then isolated via PCR amplification. PvNod41 is an atypical aspartyl peptidase of the A1B subfamily with an optimal hydrolytic activity at pH 4.5. We demonstrate that PvNod41 has limited peptidase activity against casein and is partially inhibited by pepstatin A. A PvNod41-specific antiserum was used to assess the expression pattern of this protein in different plant organs and throughout root nodule development, revealing that PvNod41 is found only in bean root nodules and is confined to uninfected cells.ConclusionsTo date, only a small number of atypical aspartyl peptidases have been characterized in plants. Their particular spatial and temporal expression patterns along with their unique enzymatic properties imply a high degree of functional specialization. Indeed, PvNod41 is closely related to CDR1, an Arabidopsis thaliana extracellular aspartyl protease involved in defense against bacterial pathogens. PvNod41's biochemical properties and specific cell-type localization, in uninfected cells of the common bean root nodule, strongly suggest that this aspartyl peptidase has a key role in plant defense during the symbiotic interaction.

Highlights

  • The legume-rhizobium symbiosis requires the formation of root nodules, specialized organs where the nitrogen fixation process takes place

  • We report the isolation and characterization of PvNod41, a novel aspartic peptidase from common bean (Phaseolus vulgaris L.) that can be classified as a plant atypical aspartic peptidases (APs)

  • Purification of nodulin 41 (PvNod41) and determination of its primary structure PvNod41 was first detected in an attempt to isolate root nodule proteins able to interact with a synthetic peptide derived from the amino acid sequence of nodulin 30 [24]

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Summary

Introduction

The legume-rhizobium symbiosis requires the formation of root nodules, specialized organs where the nitrogen fixation process takes place. Leguminous plants can establish mutually beneficial associations with soil N2-fixing bacteria, mainly belonging to the Rhizobiacea family (rhizobia) [1,2]. This remarkable biological process culminates in the formation of specialized organs, the symbiotic nodules, where the N2 fixation process takes place. Whereas the central tissue is composed mainly of large infected cells intercalated with smaller, vacuolated uninfected cells, the peripheral tissue includes: from the outside to the inside, the outer cortex, the nodule endodermis, and the inner cortex ( called the nodule parenchyma), which contains the vascular bundles [4]

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