Abstract

Simple SummaryCholangiocarcinoma (CCA) is a rare and highly aggressive tumor with limited therapeutic options, thus underscoring the need to develop novel therapeutic approaches. We analyzed a publicly available CCA patient database to identify mutations in DNA damage response (DDR) genes. Mutations in DDR genes were prevalent, thus rendering these tumors potentially susceptible to poly-ADP-ribose polymerase (PARP) inhibition. PARP genes are critical to DNA repair and genomic stability. The role of PARP inhibitors in CCA was investigated by employing a series of in vitro functional assays and in vivo patient-derived xenograft models. This study highlights the therapeutic potential of PARP inhibitors alone or in combination with the chemotherapeutic agent gemcitabine for the treatment of CCA.Cholangiocarcinoma (CCA) is the second most common hepatobiliary cancer, an aggressive malignancy with limited therapeutic options. PARP (poly (ADP-ribose) polymerase) 1 and 2 are important for deoxyribonucleotide acid (DNA) repair and maintenance of genomic stability. PARP inhibitors (PARPi) such as niraparib have been approved for different malignancies with genomic alteration in germline BRCA and DNA damage response (DDR) pathway genes. Genomic alterations were analyzed in DDR genes in CCA samples employing The Cancer Genome Atlas (TCGA) database. Mutations were observed in various DDR genes, and 35.8% cases had alterations in at least one of three genes (ARID1A, BAP1 and ATM), suggesting their susceptibility to PARPi. Niraparib treatment suppressed cancer cell viability and survival, and also caused G2/M cell cycle arrest in patient-derived xenograft cells lines (PDXC) and established CCA cells harboring DDR gene mutations. PARPi treatment also induced apoptosis and caspase3/7 activity in PDXC and CCA cell lines, and substantially reduced expression of BCL2, BCL-XL and MCL1 proteins. Niraparib caused a significant increase in oxidative stress, and induced activation of DNA damage markers, phosphorylation of CHK2 and replication fork stalling. Importantly, niraparib, in combination with gemcitabine, produced sustained and robust inhibition of tumor growth in vivo in a patient-derived xenograft (PDX) model more effectively than either treatment alone. Furthermore, tissue samples from mice treated with niraparib and gemcitabine display significantly lower expression levels of pHH3 and Ki-67, which are a mitotic and proliferative marker, respectively. Taken together, our results indicate niraparib as a novel therapeutic agent alone or in combination with gemcitabine for CCA.

Highlights

  • Cholangiocarcinoma (CCA) is a highly aggressive biliary tract cancer (BTC) that accounts for 10–20% [1] of all hepatobiliary malignancies

  • PARP inhibition has not been extensively studied in CCA patients, and data regarding the role of PARP inhibitors (PARPi) in BTC patients possessing BRCA and DNA damage response (DDR) mutations is sparse [23,24,25]

  • We investigated the effects of PARPi therapy on CCA using cell lines and novel patient-derived xenograft (PDX) models harboring DDR mutations

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Summary

Introduction

Cholangiocarcinoma (CCA) is a highly aggressive biliary tract cancer (BTC) that accounts for 10–20% [1] of all hepatobiliary malignancies. CCA is the second most common hepatic cancer with poor outcomes, [2] with a 5-year overall survival rate of less than 5% [3]. Inhibiting PARP activity leads to unrepaired SSBs and accumulation of stalled replications forks, resulting in the formation of lethal DNA double-strand breaks [19] that are preferentially repaired by homologous recombination (HR)-mediated repair (HRR) pathways [16,18]. PARP inhibition has not been extensively studied in CCA patients, and data regarding the role of PARPi in BTC patients possessing BRCA and DDR mutations is sparse [23,24,25]

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