Abstract

Staphylococcus aureus is a major human pathogen causing a wide range of nosocomial infections including pulmonary, urinary, and skin infections. Notably, the emergence of bacterial strains resistant to conventional antibiotics has prompted researchers to find new compounds capable of killing these pathogens. Nature is undoubtedly an invaluable source of bioactive molecules characterized by an ample chemical diversity. They can act as unique platform providing new scaffolds for further chemical modifications in order to obtain compounds with optimized biological activity. A class of natural compounds with a variety of biological activities is represented by alkaloids, important secondary metabolites produced by a large number of organisms including bacteria, fungi, plants, and animals. In this work, starting from the screening of 39 alkaloids retrieved from a unique in-house library, we identified a heterodimer β-carboline alkaloid, nigritanine, with a potent anti-Staphylococcus action. Nigritanine, isolated from Strychnos nigritana, was characterized for its antimicrobial activity against a reference and three clinical isolates of S. aureus. Its potential cytotoxicity was also evaluated at short and long term against mammalian red blood cells and human keratinocytes, respectively. Nigritanine showed a remarkable antimicrobial activity (minimum inhibitory concentration of 128 µM) without being toxic in vitro to both tested cells. The analysis of the antibacterial activity related to the nigritanine scaffold furnished new insights in the structure–activity relationships (SARs) of β-carboline, confirming that dimerization improves its antibacterial activity. Taking into account these interesting results, nigritanine can be considered as a promising candidate for the development of new antimicrobial molecules for the treatment of S. aureus-induced infections.

Highlights

  • The discovery of antibiotics in the 1900s led to a medical revolution in the fight against bacterial infections

  • In this work, starting from the screening of 39 alkaloids retrieved from a unique in-house library, we identified a heterodimer β-carboline alkaloid, nigritanine, with a potent anti-Staphylococcus action

  • All components of our collection are incorporated into a virtual library, and their chemical and physicochemical features are analyzed by means of cheminformatics tools, showing a satisfactory chemical diversity

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Summary

Introduction

The discovery of antibiotics in the 1900s led to a medical revolution in the fight against bacterial infections. Alkaloids are a large and structurally diverse group of nitrogen-containing compounds (one or more nitrogen atoms within a heterocycle ring) [8]. Alkaloids can occur as monomers, dimers (bisalkaloids), trimers, or tetramers According to their chemical structure, alkaloids are classified in heterocyclic alkaloids ( known as typical alkaloids), containing nitrogen in the heterocycle and originating from amino acids, and nonheterocyclic alkaloids ( known as atypical or proto-alkaloids), containing a nitrogen atom derived from an amino acid which is not a part of the heterocyclic ring [9]. An in-house library of about 1000 natural products and their derivatives was used as a unique source of lead compounds to identify new potential antibacterial alkaloids. From the screening of all the alkaloids present in this library, the rare β-carboline heterodimer nigritanine was identified and showed a potent antistaphylococcal activity

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