Abstract

Fractionation of the bioactive extract of a culture of the marine derived actinomycete Streptomyces cyaneofuscatus M-157 led to the isolation of the known 3-hydroxyquinaldic acid (4), its amide (5) and three new derivatives (1–3) containing different amino acid residues. The structures of the new molecules (1–3), including their absolute configuration, were determined by the analysis of their ESI-TOF MS and one-dimensional (1D) and two-dimensional (2D) NMR spectra and advanced Marfey’s analysis of their hydrolyzation products. Compound 3 spontaneously dimerized in solution to give the disulfide derivative 6. Unfortunately, none of the new compounds isolated confirmed the antimicrobial activity found in the bacterial extract, perhaps indicating that such antibacterial activity might be due to presence in the extract at the trace level of larger bioactive 3-hydroxyquinaldic acid derivatives from which compounds 1–3 are biosynthetic precursors. Cytotoxicity tests confirmed the moderate and weak IC50 values of 15.6 and 51.5 µM for compounds 5 and 1, respectively.

Highlights

  • Marine actinomycetes continue to be the source of new natural products with interesting bioactive properties

  • The 16S rDNA of strain M-157 was previously amplified by polymerase chain reaction (PCR) and

  • The 16S rDNA of strain M-157 was previously amplified by polymerase chain reaction (PCR) and sequenced [13]

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Summary

Introduction

Marine actinomycetes continue to be the source of new natural products with interesting bioactive properties. Depsipeptides containing quinaldic acid moieties in their structures, called chromodepsipeptides, constitute an interesting structural class due to their relevant biological activities These include antibiotics, such as the antibiotics UK-63,052, UK-63,598, and UK-65,662 [1], and their sulfoxide derivatives RK-1355A and B [2], luzopeptins A–C [3,4,5], quinaldopeptin [6] and sandramycin [7,8], or potent cytotoxic agents, such as thiocoraline [9,10] or the structurally related thiochondrilline C [11]. Of this strain identified the presence of 3-hydroquinaldic together with some new structurally Fractionation of this extract using reversed phase flashacid chromatography and HPLC yielded 3related natural products.

Taxonomy and Phylogenetic Analysis of the Strain M-157
Isolation and Structural
NMR data
COSY and HMBC observed in theof structure
COSYby andderivatization
Discussion
General Experimental Procedures
Taxonomic Identification of the Producing Microorganism
Fermentation of the Producing Microorganism
Extraction and Bioassay-Guided Isolation
Hydrolysis and Marfey’s Analysis of Compounds 1 and 2
Oxidation of Compound 3 with Performic Acid and Marfey’s Analysis
Antibacterial Activity Assays
Cytotoxicity Assays
Full Text
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